GSBS Student Publications


Slow translocon gating causes cytosolic exposure of transmembrane and lumenal domains during membrane protein integration

GSBS Program

Biochemistry & Molecular Pharmacology

UMMS Affiliation

Graduate School of Biomedical Sciences; Department of Biochemistry and Molecular Pharmacology



Document Type


Medical Subject Headings

Calcium-Binding Proteins; Cells, Cultured; Cytosol; Intracellular Membranes; Membrane Glycoproteins; Membrane Proteins; Models, Molecular; Permeability; Protein Folding; Protein Sorting Signals; Protein Transport; Receptors, Cytoplasmic and Nuclear; Receptors, Peptide; Saccharomyces cerevisiae Proteins; Translocation, Genetic; Ubiquitin; beta-Fructofuranosidase


Life Sciences | Medicine and Health Sciences


Integral membrane proteins are cotranslationally inserted into the endoplasmic reticulum via the protein translocation channel, or translocon, which mediates the transport of lumenal domains, retention of cytosolic domains and integration of transmembrane spans into the phospholipid bilayer. Upon translocon binding, transmembrane spans interact with a lateral gate, which regulates access to membrane phospholipids, and a lumenal gate, which controls the translocation of soluble domains. We analyzed the in vivo kinetics of integration of model membrane proteins in Saccharomyces cerevisiae using ubiquitin translocation assay reporters. Our findings indicate that the conformational changes in the translocon that permit opening of the lumenal and lateral channel gates occur less rapidly than elongation of the nascent polypeptide. Transmembrane spans and lumenal domains are therefore exposed to the cytosol during integration of a polytopic membrane protein, which may pose a challenge to the fidelity of membrane protein integration.

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Citation: Nat Struct Mol Biol. 2006 Oct;13(10):930-6. Epub 2006 Sep 17. Link to article on publisher's site

DOI of Published Version


Related Resources

Link to article in PubMed

Journal Title

Nature structural and molecular biology

PubMed ID