Analysis of Microarray and RNA-seq Expression Profiling Data
Program in Bioinformatics and Integrative Biology; Department of Biochemistry and Molecular Pharmacology
Bioinformatics | Computational Biology
Gene expression profiling refers to the simultaneous measurement of the expression levels of a large number of genes (often all genes in a genome), typically in multiple experiments spanning a variety of cell types, treatments, or environmental conditions. Expression profiling is accomplished by assaying mRNA levels with microarrays or next-generation sequencing technologies (RNA-seq). This introduction describes normalization and analysis of data generated from microarray or RNA-seq experiments.
DOI of Published Version
Cold Spring Harb Protoc. 2016 Aug 29. doi: 10.1101/pdb.top093104. Link to article on publisher's site
Cold Spring Harbor protocols
Hung, Jui-Hung and Weng, Zhiping, "Analysis of Microarray and RNA-seq Expression Profiling Data" (2016). Program in Bioinformatics and Integrative Biology Publications and Presentations. 104.