UMMS Affiliation

Department of Biochemistry and Molecular Pharmacology; Program in Molecular Medicine

Date

3-17-2004

Document Type

Article

Subjects

Animals; Animals, Genetically Modified; Biotinylation; Blotting, Northern; Caenorhabditis elegans; Drosophila; Gene Silencing; Genetic Techniques; Hela Cells; Humans; MicroRNAs; Molecular Sequence Data; Oligonucleotides; Phenotype; RNA Interference; RNA, Messenger; RNA, Small Interfering; Transfection

Disciplines

Life Sciences | Medicine and Health Sciences

Abstract

Hundreds of microRNAs (miRNAs) and endogenous small interfering RNAs (siRNAs) have been identified from both plants and animals, yet little is known about their biochemical modes of action or biological functions. Here we report that 2'-O-methyl oligonucleotides can act as irreversible, stoichiometric inhibitors of small RNA function. We show that a 2'-O-methyl oligonucleotide complementary to an siRNA can block mRNA cleavage in Drosophila embryo lysates and HeLa cell S100 extracts and in cultured human HeLa cells. In Caenorhabditis elegans, injection of the 2'-O-methyl oligonucleotide complementary to the miRNA let-7 can induce a let-7 loss-of-function phenocopy. Using an immobilized 2'-O-methyl oligonucleotide, we show that the C. elegans Argonaute proteins ALG-1 and ALG-2, which were previously implicated in let-7 function through genetic studies, are constituents of a let-7-containing protein-RNA complex. Thus, we demonstrate that 2'-O-methyl RNA oligonucleotides can provide an efficient and straightforward way to block small RNA function in vivo and furthermore can be used to identify small RNA-associated proteins that mediate RNA silencing pathways.

Rights and Permissions

Citation: PLoS Biol. 2004 Apr;2(4):E98. Epub 2004 Feb 24. Link to article on publisher's site

DOI of Published Version

10.1371/journal.pbio.0020098

Related Resources

Link to Article in PubMed

Journal Title

PLoS biology

PubMed ID

15024405

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