Publications from 2009
Casein kinase 1 delta regulates the pace of the mammalian circadian clock, Jean-Pierre Etchegaray, Kazuhiko K. Machida, Elizabeth Noton, Cara M. Constance, Robert Dallmann, Marianne N. Di Napoli, Jason P. DeBruyne, Christopher M. Lambert, Elizabeth A. Yu, Steven M. Reppert, and David R. Weaver
Glia and muscle sculpt neuromuscular arbors by engulfing destabilized synaptic boutons and shed presynaptic debris, Yuly F. Fuentes Medel, Mary A. Logan, James A. Ashley, Bulent Ataman, Vivian Budnik, and Marc R. Freeman
A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors, Christian A. Grove, Federico De Masi, M. Inmaculada Barrasa, Daniel E. Newburger, Mark J. Alkema, Martha L. Bulyk, and Albertha J. M. Walhout
The circadian clock protein Period 1 regulates expression of the renal epithelial sodium channel in mice, Michelle L. Gumz, Lisa R. Stow, I. Jeanette Lynch, Megan M. Greenlee, Alicia Rudin, Brian D. Cain, David R. Weaver, and Charles D. Wingo
The Drosophila Activin-like ligand Dawdle signals preferentially through one isoform of the Type-I receptor Baboon, Philip A. Jensen, Xiaoyan Zheng, Tzumin Lee, and Michael B. O'Connor
Vascular rhythms and adaptation: do your arteries know what time it is, John F. Keaney Jr. and David R. Weaver
Deletion of the secretory vesicle proteins IA-2 and IA-2beta disrupts circadian rhythms of cardiovascular and physical activity, Soo Mi Kim, Andrea Power, Steven L. Coon, Cara M. Constance, Takuya Nishimura, Hiroki Hirai, Tao Cai, Christoph Eisner, David R. Weaver, Hugh D. Piggins, David C. Klein, Jurgen Schnermann, and Abner L. Notkins
Trans-synaptic transmission of vesicular Wnt signals through Evi/Wntless, Ceren Korkut, Bulent Ataman, Preethi Ramachandran, James A. Ashley, Romina Barria, Norberto G. Gherbesi, and Vivian Budnik
WNTs tune up the neuromuscular junction, Ceren Korkut and Vivian Budnik
A neural circuit mechanism integrating motivational state with memory expression in Drosophila, Michael Jonathan Krashes, Shamik DasGupta, Andrew Vreede, Benjamin White, J. Douglas Armstrong, and Scott Waddell
New genetic tools for cell lineage analysis in Drosophila, Tzumin Lee
Nuclear receptor unfulfilled regulates axonal guidance and cell identity of Drosophila mushroom body neurons, Suewei Lin, Yaling Huang, and Tzumin Lee
Antennal circadian clocks coordinate sun compass orientation in migratory monarch butterflies, Christine Merlin, Robert J. Gegear, and Steven M. Reppert
Neuronal death or dismemberment mediated by Sox14, Jeannette M. Osterloh and Marc R. Freeman
A Tyramine-Gated Chloride Channel Coordinates Distinct Motor Programs of a Caenorhabditis elegans Escape Response, Jennifer K. Pirri, Adam D. McPherson, Jamie L. Donnelly, Michael M. Francis, and Mark J. Alkema
There are many ways to train a fly, Jena L. Pitman, Shamik DasGupta, Michael J. Krashes, Benjamin Leung, Paola N. Perrat, and Scott Waddell
Sleep: what goes up must come down, Jena L. Pitman and Scott Waddell
A critical step for postsynaptic F-actin organization: regulation of Baz/Par-3 localization by aPKC and PTEN, Preethi Ramachandran, Romina Barria, James A. Ashley, and Vivian Budnik
A comparative study of Drosophila and human A-type lamins, Sandra R. Schulze, Beatrice Curio-Penny, Sean D. Speese, George Dialynas, Diane E. Cryderman, Caitrin W. McDonough, Demet Nalbant, Melissa Petersen, Vivian Budnik, Pamela K. Geyer, and Lori L. Wallrath
Twin-spot MARCM to reveal the developmental origin and identity of neurons, Hung-Hsiang Yu, Chun-Hong Chen, Lei Shi, Yaling Huang, and Tzumin Lee
Endodomain diversity in the Drosophila Dscam and its roles in neuronal morphogenesis, Hung-Hsiang Yu, Jacob S. Yang, Jian Wang, Yaling Huang, and Tzumin Lee
Defining behavioral and molecular differences between summer and migratory monarch butterflies, Haisun Zhu, Robert J. Gegear, Amy L. Casselman, Sriramana Kanginakudru, and Steven M. Reppert
Publications from 2008
Rapid activity-dependent modifications in synaptic structure and function require bidirectional Wnt signaling, Bulent Ataman, James A. Ashley, Michael Gorczyca, Preethi Ramachandran, Wernher Fouquet, Stephan J. Sigrist, and Vivian Budnik
Organization and postembryonic development of glial cells in the adult central brain of Drosophila, Takeshi Awasaki, Sen-Lin Lai, Kei Ito, and Tzumin Lee
RNA interference screening in Drosophila primary cells for genes involved in muscle assembly and maintenance, Jianwu Bai, Richard Binari, Jian-Quan Ni, Marina Vijayakanthan, Hong-Sheng Li, and Norbert Perrimon
hVAPB, the causative gene of a heterogeneous group of motor neuron diseases in humans, is functionally interchangeable with its Drosophila homologue DVAP-33A at the neuromuscular junction, Andrea Chai, James Withers, Young Ho Koh, Katherine Parry, Hong Bao, Bing Zhang, Vivian Budnik, and Giuseppa Pennetta
Learned odor discrimination in Drosophila without combinatorial odor maps in the antennal lobe, Shamik DasGupta and Scott Waddell
A plastic clock: how circadian rhythms respond to environmental cues in Drosophila, Raphaelle Dubruille and Patrick Emery
Circadian rhythms: timing the sense of smell, Patrick Emery and Michael M. Francis
Cryptochrome mediates light-dependent magnetosensitivity in Drosophila, Robert J. Gegear, Amy L. Casselman, Scott Waddell, and Steven M. Reppert
Drosophila memory: will Orb(2) predict the future, Michael Jonathan Krashes and Scott Waddell
Rapid consolidation to a radish and protein synthesis-dependent long-term memory after single-session appetitive olfactory conditioning in Drosophila, Michael Jonathan Krashes and Scott Waddell
Clonal analysis of Drosophila antennal lobe neurons: diverse neuronal architectures in the lateral neuroblast lineage, Sen-Lin Lai, Takeshi Awasaki, Kei Ito, and Tzumin Lee
DLGS97/SAP97 is developmentally upregulated and is required for complex adult behaviors and synapse morphology and function, Carolina Mendoza-Topaz, Francisco Urra, Romina Barria, Valeria Albornoz, Diego Ugalde, Ulrich Thomas, Eckart Gundelfinger, Ricardo Delgado, Manuel Kukuljan, Parthena D. Sanxaridis, Susan Tsunoda, M. Fernanda Ceriani, Vivian Budnik, and Jimena Sierralta
Mutation of a TADR protein leads to rhodopsin and Gq-dependent retinal degeneration in Drosophila, Lina Ni, Peiyi Guo, Keith Reddig, Mirna Mitra, and Hong-Sheng Li
Loss of responsiveness to melatonin in the aging mouse suprachiasmatic nucleus, Charlotte von Gall and David R. Weaver
Evolutionary conserved role for TARPs in the gating of glutamate receptors and tuning of synaptic function, Rui Wang, Craig S. Walker, Penelope Brockie, Michael M. Francis, Jerry E. Mellem, David M. Madsen, and Andres V. Maricq
Dynein-dynactin complex is essential for dendritic restriction of TM1-containing Drosophila Dscam, Jacob S. Yang, Jia-Min Bai, and Tzumin Lee
Rhythmic expression of clock genes in the ependymal cell layer of the third ventricle of rodents is independent of melatonin signaling, Shinobu Yasuo, Charlotte von Gall, David R. Weaver, and Horst-Werner Korf
Chasing migration genes: a brain expressed sequence tag resource for summer and migratory monarch butterflies (Danaus plexippus), Haisun Zhu, Amy L. Casselman, and Steven M. Reppert
Cryptochromes define a novel circadian clock mechanism in monarch butterflies that may underlie sun compass navigation, Haisun Zhu, Ivo Sauman, Quan Yuan, Amy L. Casselman, Myai Emery-Le, Patrick Emery, and Steven M. Reppert
Draper-dependent glial phagocytic activity is mediated by Src and Syk family kinase signalling, Jennifer S. Ziegenfuss, Romi Biswas, Michelle A. Avery, Kyoungja Hong, Amy E. Sheehan, Yee-Guide Yeung, E. Richard Stanley, and Marc R. Freeman
Publications from 2007
Transient, light-induced rhythmicity in mPer-deficient mice, Kiho Bae and David R. Weaver
Interactions between circadian neurons control temperature synchronization of Drosophila behavior, Ania Busza, Alejandro D. Murad, and Patrick Emery
CLOCK and NPAS2 have overlapping roles in the suprachiasmatic circadian clock, Jason P. DeBruyne, David R. Weaver, and Steven M. Reppert
Peripheral circadian oscillators require CLOCK, Jason P. DeBruyne, David R. Weaver, and Steven M. Reppert
Mutagenesis with Drosophila, Patrick Emery
Protein extraction from Drosophila heads, Patrick Emery
RNA extraction from Drosophila heads, Patrick Emery
RNase protection assay, Patrick Emery
Glia got rhythm, Patrick Emery and Marc R. Freeman
A look inside, Marc R. Freeman
A potential dimerization region of dCAMTA is critical for termination of fly visual response, Ping Gong, Junhai Han, Keith Reddig, and Hong-Sheng Li
Postsynaptic membrane addition depends on the Discs-Large-interacting t-SNARE Gtaxin, David Gorczyca, James A. Ashley, Sean Speese, Norberto G. Gherbesi, Ulrich Thomas, Eckart Gundelfinger, L. Sian Gramates, and Vivian Budnik
Prolonged G(q) activity triggers fly rhodopsin endocytosis and degradation, and reduces photoreceptor sensitivity, Junhai Han, Keith Reddig, and Hong-Sheng Li
PER-TIM interactions with the photoreceptor cryptochrome mediate circadian temperature responses in Drosophila, Rachna Kaushik, Pipat Nawathean, Ania Busza, Alejandro D. Murad, Patrick Emery, and Michael Rosbash
Drosophila olfactory memory: single genes to complex neural circuits, Alex Carl Keene and Scott Waddell
Sequential use of mushroom body neuron subsets during drosophila odor memory processing, Michael Jonathan Krashes, Alex Carl Keene, Benjamin M. Leung, J. Douglas Armstrong, and Scott Waddell
Smelling excitement in the antennal lobe, Benjamin M. Leung and Scott Waddell
Crucial role of Drosophila neurexin in proper active zone apposition to postsynaptic densities, synaptic growth, and synaptic transmission, Jingjun Li, James A. Ashley, Vivian Budnik, and Manzoor A. Bhat
The scoop on the fly brain: glial engulfment functions in Drosophila, Mary A. Logan and Marc R. Freeman
A subset of dorsal neurons modulates circadian behavior and light responses in Drosophila, Alejandro D. Murad, Myai Emery-Le, and Patrick Emery
The Drosophila homolog of MCPH1, a human microcephaly gene, is required for genomic stability in the early embryo, Jamie L. Rickmyre, Shamik DasGupta, Danny Liang-Yee Ooi, Jessica Keel, Ethan Lee, Marc W. Kirschner, Scott Waddell, and Laura A. Lee
Roles of Drosophila Kruppel-homolog 1 in neuronal morphogenesis, Lei Shi, Suewei Lin, Yelena Grinberg, Yannick Beck, Christina M. Grozinger, Gene E. Robinson, and Tzumin Lee
Specific Drosophila Dscam juxtamembrane variants control dendritic elaboration and axonal arborization, Lei Shi, Hung-Hsiang Yu, Jacob S. Yang, and Tzumin Lee
Drosophila sensory neurons require Dscam for dendritic self-avoidance and proper dendritic field organization, Peter Soba, Sijun Zhu, Kazuo Emoto, Susan Younger, Shun-Jen Yang, Hung-Hsiang Yu, Tzumin Lee, Lily Yeh Jan, and Yuh-Nung Jan
Formation and function of flavin anion radical in cryptochrome 1 blue-light photoreceptor of monarch butterfly, Sang-Hun Song, Nuri Ozturk, Tracy R. Denaro, N. Ozlem Arat, Ya-Ting Kao, Haisun Zhu, Dongping Zhong, Steven M. Reppert, and Aziz Sancar
Wnts: up-and-coming at the synapse, Sean D. Speese and Vivian Budnik
Insect cryptochromes: gene duplication and loss define diverse ways to construct insect circadian clocks, Quan Yuan, Danielle Metterville, Adriana D. Briscoe, and Steven M. Reppert
Neuronal temporal identity in post-embryonic Drosophila brain, Hung-Hsiang Yu and Tzumin Lee
Publications from 2006
Nuclear trafficking of Drosophila Frizzled-2 during synapse development requires the PDZ protein dGRIP, Bulent Ataman, James A. Ashley, David Gorczyca, Michael Gorczyca, Dennis Mathew, Carolin Wichmann, Stephan J. Sigrist, and Vivian Budnik
Scaffolding proteins at the Drosophila neuromuscular junction, Bulent Ataman, Vivian Budnik, and Ulrich Thomas
Selected methods for the anatomical study of Drosophila embryonic and larval neuromuscular junctions, Vivian Budnik, Michael Gorczyca, and Andreas Prokop
A clock shock: mouse CLOCK is not required for circadian oscillator function, Jason P. DeBruyne, Elizabeth Noton, Christopher M. Lambert, Elizabeth S. Maywood, David R. Weaver, and Steven M. Reppert
The polycomb group protein EZH2 is required for mammalian circadian clock function, Jean-Pierre Etchegaray, Xiaoming Yang, Jason P. DeBruyne, Antoine H.F.M. Peters, David R. Weaver, Thomas Jenuwein, and Steven M. Reppert
The Drosophila radish gene encodes a protein required for anesthesia-resistant memory, Elisabeth Folkers, Scott Waddell, and William G. Quinn
Sculpting the nervous system: glial control of neuronal development, Marc R. Freeman
Glial cell biology in Drosophila and vertebrates, Marc R. Freeman and Johnna E. Doherty
Plasticity and second messengers during synapse development, Leslie C. Griffith and Vivian Budnik
The fly CAMTA transcription factor potentiates deactivation of rhodopsin, a G protein-coupled light receptor, Junhai Han, Ping Gong, Keith Reddig, Mirna Mitra, Peiyi Guo, and Hong-Sheng Li
Drosophila dorsal paired medial neurons provide a general mechanism for memory consolidation, Alex Carl Keene, Michael Jonathan Krashes, Benjamin M. Leung, Jessica A. Bernard, and Scott Waddell
Genetic mosaic with dual binary transcriptional systems in Drosophila, Sen-Lin Lai and Tzumin Lee
Peripheral gene expression rhythms in a diurnal rodent, Christopher M. Lambert and David R. Weaver
The Drosophila cell corpse engulfment receptor Draper mediates glial clearance of severed axons, Jennifer MacDonald, Margaret Beach, Ermelinda Porpiglia, Amy E. Sheehan, Ryan J. Watts, and Marc R. Freeman
A colorful model of the circadian clock, Steven M. Reppert
Introduction on the use of the Drosophila embryonic/larval neuromuscular junction as a model system to study synapse development and function, and a brief summary of pathfinding and target recognition, Catalina Ruiz-Canada and Vivian Budnik
Synaptic cytoskeleton at the neuromuscular junction, Catalina Ruiz-Canada and Vivian Budnik
Ectopic CRYPTOCHROME renders TIM light sensitive in the Drosophila ovary, Brandy L. Rush, Alejandro D. Murad, Patrick Emery, and Jadwiga M. Giebultowicz
Steroid hormone-dependent transformation of polyhomeotic mutant neurons in the Drosophila brain, Jian Wang, Ching-Hsien J. Lee, Suewei Lin, and Tzumin Lee
Baboon/dSmad2 TGF-beta signaling is required during late larval stage for development of adult-specific neurons, Xiaoyan Zheng, Christopher T. Zugates, Zouyan Lu, Lei Shi, Jia-Min Bai, and Tzumin Lee
Gradients of the Drosophila Chinmo BTB-zinc finger protein govern neuronal temporal identity, Sijun Zhu, Suewei Lin, Chih-Fei Kao, Takeshi Awasaki, Ann-Shyn Chiang, and Tzumin Lee
Publications from 2005
Fasciclin II signals new synapse formation through amyloid precursor protein and the scaffolding protein dX11/Mint, James A. Ashley, Mary Packard, Bulent Ataman, and Vivian Budnik
Distinct structural features of phospholipids differentially determine ethanol sensitivity and basal function of BK channels, John J. Crowley, Steven N. Treistman, and Alejandro M. Dopico
Glial (and neuronal) cells missing, Marc R. Freeman
Glial control of synaptogenesis, Marc R. Freeman
Rhythms in clock proteins in the mouse pars tuberalis depend on MT1 melatonin receptor signalling, Antje Jilg, Juliane Moek, David R. Weaver, Horst-Werner Korf, Jorg H. Stehle, and Charlotte von Gall
Drosophila memory: dopamine signals punishment, Alex Carl Keene and Scott Waddell
Analysis of the prokineticin 2 system in a diurnal rodent, the unstriped Nile grass rat (Arvicanthis niloticus), Christopher M. Lambert, Kazuhiko K. Machida, Laura Smale, Antonio A. Nunez, and David R. Weaver
Wingless signaling at synapses is through cleavage and nuclear import of receptor DFrizzled2, Dennis Mathew, Bulent Ataman, Jinyun Chen, Yali Zhang, Susan Cumberledge, and Vivian Budnik
Chronic ethanol exposure induces an N-type calcium channel splice variant with altered channel kinetics, Philip M. Newton, Keith Tully, Thomas McMahon, Jacklyn Connolly, Jahan Dadgar, Steven N. Treistman, and Robert O. Messing