This collection showcases journal articles and other publications and presentations authored by researchers in the UMass Metabolic Network, a consortium of UMass faculty members who share a common interest in metabolism research.

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Publications from 2017

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Cleaning House: Selective Autophagy of Organelles, Allyson L. Anding and Eric H. Baehrecke

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The connection between BRG1, CTCF and topoisomerases at TAD boundaries, Ahmet Rasim Barutcu, Jane B. Lian, Janet L. Stein, Gary S. Stein, and Anthony N. Imbalzano

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Molecular Basis and Targeted Inhibition of CBFbeta-SMMHC Acute Myeloid Leukemia, Lucio H. Castilla and John H. Bushweller

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Systemic insulin sensitivity is regulated by GPS2 inhibition of AKT ubiquitination and activation in adipose tissue, Carly T. Cederquist, Claudia Lentucci, Camila Martinez Calejman, Vanessa Hayashi, Joseph Orofino, David A. Guertin, Susan K. Fried, Mi-Jeong Lee, M. Dafne Cardamone, and Valentina Perissi

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The role of RNA uptake in platelet heterogeneity, Lauren Clancy, Lea M. Beaulieu, Kahraman Tanriverdi, and Jane E. Freedman

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Cardiometabolic disease in South Asians: A global health concern in an expanding population, A. Das, B. Ambale-Venkatesh, J. A. C. Lima, Jane E. Freedman, A. Spahillari, R. Das, S. Das, R. V. Shah, and V. L. Murthy

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Melanoma mystery, Roger J. Davis

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Comprehensive Essentiality Analysis of the Mycobacterium tuberculosis Genome via Saturating Transposon Mutagenesis, Michael A. DeJesus, Elias R. Gerrick, Weizhen Xu, Sae Woong. Park, Jarukit E. Long, Cara C. Boutte, Eric J. Rubin, Dirk Schnappinger, Sabine Ehrt, Sarah M. Fortune, Christopher M. Sassetti, and Thomas R. Ioerger

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Statistical analysis of genetic interactions in Tn-Seq data, Michael A. DeJesus, Subhalaxmi Nambi, Clare M. Smith, Richard E. Baker, Christopher M. Sassetti, and Thomas R. Ioerger

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Integrating the UPRmt into the mitochondrial maintenance network, Christopher J. Fiorese and Cole M. Haynes

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Challenges and Opportunities in Linking Long Noncoding RNAs to Cardiovascular, Lung, and Blood Diseases, Jane E. Freedman; Joseph M. Miano; and National Heart, Lung, and Blood Institute Workshop Participants

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Unravelling the pleiotropic role of the MceG ATPase in Mycobacterium smegmatis, Julia Garcia-Fernandez, Kadamba Papavinasasundaram, Beatriz Galan, Christopher M. Sassetti, and Jose L. Garcia

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Bacterial Metabolism Affects the C. elegans Response to Cancer Chemotherapeutics, Aurian Garcia-Gonzalez, Ashlyn D. Ritter, Shaleen Shrestha, Erik C. Andersen, L. Safak Yilmaz, and Albertha J. M. Walhout

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Central Role of IL-23 and IL-17 Producing Eosinophils as Immunomodulatory Effector Cells in Acute Pulmonary Aspergillosis and Allergic Asthma, Evelyn V. Santos Guerra, Chrono K. Lee, Charles A. Specht, Bhawna Yadav, Haibin Huang, Ali Akalin, Jun R. Huh, Christian Mueller, and Stuart M. Levitz

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Chemical-Induced Vitiligo, John E. Harris

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Optimizing Vitiligo Management: Past, Present, and Future, John E. Harris

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The Oxidative Stress Response in Caenorhabditis elegans Requires the GATA Transcription Factor ELT-3 and SKN-1/Nrf2, Queenie Hu, Dayana R. D'Amora, Lesley T. MacNeil, Albertha J. M. Walhout, and Terrance J. Kubiseski (Genetics, 6-9-2017)

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Interleukin-1 inhibition facilitates recovery from liver injury and promotes regeneration of hepatocytes in alcoholic hepatitis in mice, Arvin Iracheta-Vellve, Jan Petrasek, Benedek Gyongyosi, Shashi Bala, Timea Csak, Karen Kodys, and Gyongyi Szabo

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Integrated genome-wide analysis of expression quantitative trait loci aids interpretation of genomic association studies, Roby Joehanes, Kahraman Tanriverdi, Jane E. Freedman, and Peter J. Munson

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Developmental Role of Macrophage Cannabinoid-1 Receptor Signaling in Type 2 Diabetes, Tony Jourdan, Gergo Szanda, Resat Cinar, Grzegorz Godlewski, David J. Holovac, Joshua K. Park, Sarah M. Nicoloro, Yuefei Shen, Jie Liu, Avi Z. Rosenberg, Ziyi Liu, Michael P. Czech, and George Kunos

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Thrombosis and platelets: an update, Milka Koupenova-Zamor, Beate E. Kehrel, Heather A. Corkrey, and Jane E. Freedman

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The Complex Roles of Mechanistic Target of Rapamycin in Adipocytes and Beyond, Peter L. Lee, Su Myung Jung, and David A. Guertin

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CK2 inhibitor CX-4945 destabilizes NOTCH1 and synergizes with JQ1 against human T-acute lymphoblastic leukemic cells, Haiwei Lian, Dun Li, Yun Zhou, Esther Landesman-Bollag, Guanglan Zhang, Nicole M. Anderson, Kevin Charles. Tang, Justine E. Roderick, Michelle A. Kelliher, David C. Seldin, Hui Fu, and Hui Feng

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Alcohol-related changes in the intestinal microbiome influence neutrophil infiltration, inflammation and steatosis in early alcoholic hepatitis in mice, Patrick Lowe, Benedek Gyongyosi, Abhishek Satishchandran, Arvin Iracheta-Vellve, Aditya Ambade, Karen Kodys, Donna Catalano, Doyle V. Ward, and Gyongyi Szabo

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Partial clinical remission in type 1 diabetes: a comparison of the accuracy of total daily dose of insulin of <0.3 units/kg/day to the gold standard insulin-dose adjusted hemoglobin A1c of ≤9 for the detection of partial clinical remission, Rachel L. Lundberg, Katherine R. Marino, Aastha Jasrotia, Louise S. Maranda, Bruce A. Barton, Laura C. Alonso, and Benjamin U. Nwosu

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Visualization of self-delivering hydrophobically modified siRNA cellular internalization, Socheata Ly, Deanna M. Navaroli, Marie-Claire Didiot, James Cardia, Lakshmipathi Pandarinathan, Julia F. Alterman, Kevin E. Fogarty, Clive Standley, Lawrence Lifshitz, Karl D. Bellve, Matthieu Prot, Dimas Echeverria, Silvia Corvera, and Anastasia Khvorova

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Data from: A Predictive Model for Lack of Partial Clinical Remission in New-onset Pediatric Type 1 Diabetes, Katherine R. Marino, Rachel L. Lundberg, Aastha Jasrotia, Louise S. Maranda, Michael J. Thompson, Bruce A. Barton, Laura C. Alonso, and Benjamin U. Nwosu

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A predictive model for lack of partial clinical remission in new-onset pediatric type 1 diabetes, Katherine R. Marino, Rachel L. Lundberg, Aastha Jasrotia, Louise Maranda, Michael J. Thompson, Bruce A. Barton, Laura C. Alonso, and Benjamin U. Nwosu

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Human white adipocytes convert into "rainbow" adipocytes in vitro, Giulia Maurizi, Antonella Poloni, Silvia Corvera, and Saverio Cinti

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Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors, David D. McManus, Jian Rong, Tianxiao Huan, Sean Lacey, Kahraman Tanriverdi, Peter J. Munson, Martin G. Larson, Roby Joehanes, Venkatesh Murthy, Ravi Shah, Jane E. Freedman, and Daniel Levy

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RUNX1 and breast cancer, Jose Mercado-Matos, Asia N. Matthew-Onabanjo, and Leslie M. Shaw

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Stroke and Circulating Extracellular RNAs, Eric O. Mick, Ravi Shah, Kahraman Tanriverdi, Venkatesh Murthy, Mark Gerstein, Joel Rozowsky, Robert Kitchen, Martin G. Larson, Daniel Levy, and Jane E. Freedman

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The Vitiligo Working Group recommendations for narrowband ultraviolet B light phototherapy treatment of vitiligo, Tasneem F. Mohammad, Mohammed Al-Jamal, Iltefat H. Hamzavi, John E. Harris, Giovanni Leone, Raul Cabrera, Henry W. Lim, Amit G. Pandya, and Amit Pandya

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Mammalian SWI/SNF Enzymes and the Epigenetics of Tumor Cell Metabolic Reprogramming, Jeffrey A. Nickerson, Qiong Wu, and Anthony N. Imbalzano

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Vitiligo Pathogenesis and Emerging Treatments, Medhi Rashighi and John E. Harris

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Keratinocyte-Derived Chemokines Orchestrate T-Cell Positioning in the Epidermis during Vitiligo and May Serve as Biomarkers of Disease, Jillian M. Richmond, Dinesh S. Bangari, Kingsley I. Essien, Sharif D. Currimbhoy, Joanna R. Groom, Amit G. Pandya, Michele E. Youd, Andrew D. Luster, and John E. Harris

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CXCR3 Depleting Antibodies Prevent and Reverse Vitiligo in Mice, Jillian M. Richmond, Elizabeth Masterjohn, Ruiyin Chu, Jennifer Tedstone, Michele E. Youd, and John E. Harris

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Programmable transcriptional repression in mycobacteria using an orthogonal CRISPR interference platform, Jeremy M. Rock, Forrest F. Hopkins, Alejandro Chavez, Marieme Diallo, Michael R. Chase, Elias R. Gerrick, Justin R. Pritchard, George M. Church, Eric J. Rubin, Christopher M. Sassetti, Dirk Schnappinger, and Sarah M. Fortune

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Circulating and Exosome-Packaged Hepatitis C Single-Stranded RNA Induce Monocyte Differentiation via TLR7/8 to Polarized Macrophages and Fibrocytes, Banishree Saha, Karen Kodys, Adeyinka Adejumo, and Gyongyi Szabo

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Amplification of Adipogenic Commitment by VSTM2A, Blandine Secco, Peter L. Lee, David A. Guertin, and Mathieu Laplante

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Extracellular RNAs Are Associated With Insulin Resistance and Metabolic Phenotypes, Ravi Shah, Venkatesh Murthy, Kahraman Tanriverdi, Eric O. Mick, and Jane E. Freedman

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Subclinical Atherosclerosis, Statin Eligibility, and Outcomes in African American Individuals: The Jackson Heart Study, Ravi V. Shah, Aferdita Spahillari, Stanford Mwasongwe, J. J. Carr, James G. Terry, Robert J. Mentz, Daniel Addison, Udo Hoffmann, Jared Reis, Jane E. Freedman, Joao A. C. Lima, Adolfo Correa, and Venkatesh L. Murthy

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Metabolic Inputs into the Epigenome, Upasna Sharma and Oliver J. Rando

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Interleukin-17: Why the Worms Squirm, Noah J. Silverstein and Jun R. Huh

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Decreased Thromboembolic Stroke but not Atherosclerosis or Vascular Remodeling in Mice with ROCK2-deficient Platelets, Nikola Sladojevic, Goo Taeg. Oh, Hyung-Hwan Kim, Lea M. Beaulieu, Herve Falet, Karol Kaminski, Jane E. Freedman, and James K. Liao

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Hyper- and hypo- nutrition studies of the hepatic transcriptome and epigenome suggest that PPARα regulates anaerobic glycolysis, Anthony R. Soltis, Shmulik Motola, Santiago Vernia, Christopher W. Ng, Norman J. Kennedy, Simona Dalin, Bryan J. Matthews, Roger J. Davis, and Ernest Fraenkel

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Ideal Cardiovascular Health, Cardiovascular Remodeling, and Heart Failure in Blacks: The Jackson Heart Study, Aferdita Spahillari, Jane E. Freedman, and Ravi V. Shah

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Suction blistering the lesional skin of vitiligo patients reveals useful biomarkers of disease activity, James P. Strassner, Medhi Rashighi, Maggi Ahmed Refat, Jillian M. Richmond, and John E. Harris

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Suction blistering the lesional skin of vitiligo patients reveals useful biomarkers of disease activity, James P. Strassner, Medhi Rashighi, Maggi Ahmed Refat, Jillian M. Richmond, and John E. Harris

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Gut-liver axis and sterile signals in the development of alcoholic liver disease, Gyongyi Szabo and Jan Petrasek

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PRIMA: a gene-centered, RNA-to-protein method for mapping RNA-protein interactions, Alex M. Tamburino, Ebru Kaymak, Shaleen Shrestha, Amy D. Holdorf, Sean P. Ryder, and Albertha J. M. Walhout (Translation (Austin, Tex.), 2-28-2017)

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Paternal nicotine exposure alters hepatic xenobiotic metabolism in offspring, Markus P. Vallaster, Shweta Kukreja, Xin Y. Bing, Jennifer Ngolab, Rubing Zhao-Shea, Paul D. Gardner, Andrew R. Tapper, and Oliver J. Rando

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A double-blind, placebo-controlled, phase-II clinical trial to evaluate oral simvastatin as a treatment for vitiligo, Stefan G. Vanderweil, Shinya U. Amano, Wei-Che Ko, Jillian M. Richmond, Michelle Kelley, Maryanne Makredes Senna, Andrea Pearson, Sandhya Chowdary, Celia Hartigan, Bruce A. Barton, and John E. Harris

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Dynamic Role of trans Regulation of Gene Expression in Relation to Complex Traits, Chen Yao, Roby Joehanes, Andrew D. Johnson, Tianxiao Huan, Chunyu Liu, Jane E. Freedman, Peter J. Munson, David A. Hill, Marc Vidal, and Daniel Levy

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Metabolic network modeling with model organisms, L. Safak Yilmaz and Albertha J. M. Walhout (Current opinion in chemical biology, 2-1-2017)

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C. elegans and its bacterial diet as a model for systems-level understanding of host-microbiota interactions, Jing Zhang, Amy D. Holdorf, and Albertha J. M. Walhout (Current opinion in biotechnology, 2-8-2017)

Publications from 2016

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Adult mouse model of early hepatocellular carcinoma promoted by alcoholic liver disease, Aditya Ambade, Abhishek Satishchandran, Benedek Gyongyosi, Patrick Lowe, and Gyongyi Szabo

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Hepatocellular carcinoma is accelerated by NASH involving M2 macrophage polarization mediated by hif-1alphainduced IL-10, Aditya Ambade, Abhishek Satishchandran, Banishree Saha, Benedek Gyongyosi, Patrick Lowe, Karen Kodys, Donna Catalano, and Gyongyi Szabo

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Alcoholic hepatitis accelerates early hepatobiliary cancer by increasing stemness and miR-122-mediated HIF-1alpha activation, Aditya Ambade, Abhishek Satishchandran, and Gyongyi Szabo

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The TCA cycle transferase DLST is important for MYC-mediated leukemogenesis, N. M. Anderson, Michelle A. Kelliher, and H. Feng

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The pro-inflammatory effects of miR-155 promote liver fibrosis and alcohol-induced steatohepatitis, Shashi Bala, Timea Csak, Banishree Saha, James Zatsiorsky, Karen Kodys, Donna Catalano, Abhishek Satishchandran, and Gyongyi Szabo

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Hepatic steatosis is associated with cardiometabolic risk in a rural Indian population: A prospective cohort study, Anamitra Barik, Jane E. Freedman, and Abhijit Chowdhury

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C-ing the Genome: A Compendium of Chromosome Conformation Capture Methods to Study Higher-Order Chromatin Organization; UMass Metabolic Network, Ahmet Rasim Barutcu, Andrew J. Fritz, Sayyed K. Zaidi, Andre J. van Wijnen, Jane B. Lian, Janet L. Stein, Jeffrey A. Nickerson, Anthony N. Imbalzano, and Gary S. Stein (Journal of cellular physiology)

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RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells, A. Rasim Barutcu, Deli Hong, Bryan R. Lajoie, Rachel Patton McCord, Andre J. van Wijnen, Jane B. Lian, Janet L. Stein, Job Dekker, Anthony N. Imbalzano, and Gary S. Stein (Biochimica et biophysica acta)

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SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells, A. Rasim Barutcu, Bryan R. Lajoie, Andrew J. Fritz, Rachel P. McCord, Jeffrey A. Nickerson, Andre J. van Wijnen, Jane B. Lian, Janet L. Stein, Job Dekker, Gary S. Stein, and Anthony N. Imbalzano (Genome research)

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Platelet functional and transcriptional changes induced by intralipid infusion, Lea M. Beaulieu, Olga Vitseva, Kahraman Tanriverdi, Alper Kucukural, Eric O. Mick, Naomi Hamburg, Joseph Vita, and Jane E. Freedman

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Insulin Receptor Substrate Adaptor Proteins Mediate Prognostic Gene Expression Profiles in Breast Cancer, Marc A. Becker, Yasir H. Ibrahim, Annabell S. Oh, Dedra H. Fagan, Sara A. Byron, Aaron L. Sarver, Adrian V. Lee, Leslie M. Shaw, Cheng Fan, Charles M. Perou, and Douglas Yee

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A cytoplasmic peptidoglycan amidase homologue controls mycobacterial cell wall synthesis, Cara C. Boutte, Christina E. Baer, Kadamba Papavinasasundaram, Weiru Liu, Michael R. Chase, Xavier Meniche, Sarah M. Fortune, Christopher M. Sassetti, Thomas R. Ioerger, and Eric J. Rubin

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Therapeutic Benefits of Spleen Tyrosine Kinase Inhibitor Administration on Binge Drinking-Induced Alcoholic Liver Injury, Steatosis, and Inflammation in Mice, Terence N. Bukong, Arvin Iracheta-Vellve, Benedek Gyongyosi, Aditya Ambade, Donna Catalano, Karen Kodys, and Gyongyi Szabo

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Inhibition of spleen tyrosine kinase activation ameliorates inflammation, cell death, and steatosis in alcoholic liver disease, Terence N. Bukong, Arvin Iracheta-Vellve, Banishree Saha, Aditya Ambade, Abhishek Satishchandran, Benedek Gyongyosi, Patrick Lowe, Donna Catalano, Karen Kodys, and Gyongyi Szabo

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xCT increases tuberculosis susceptibility by regulating antimicrobial function and inflammation, Yi Cai, Subhalaxmi Nambi, Christopher M. Sassetti, Fudi Wang, and Xinchun Chen

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Quantifying the metabolic contribution to photoreceptor death in retinitis pigmentosa via a mathematical model, Erika T. Camacho, Claudio Punzo, and Stephen A. Wirkus

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Alcohol and inflammatory responses: Highlights of the 2015 Alcohol and Immunology Research Interest Group (AIRIG) meeting, Abigail R. Cannon, Pranoti Mandrekar, and Mashkoor A. Choudhry

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Mdm2 Phosphorylation Regulates Its Stability and Has Contrasting Effects on Oncogene and Radiation-Induced Tumorigenesis, Michael I. Carr, Justine E. Roderick, Hugh S. Gannon, Michelle A. Kelliher, and Stephen N. Jones (Cell reports)

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Phosphorylation of the Mdm2 oncoprotein by the c-Abl tyrosine kinase regulates p53 tumor suppression and the radiosensitivity of mice, Michael I. Carr, Justine E. Roderick, Hong Zhang, Bruce A. Woda, Michelle A. Kelliher, and Stephen N. Jones

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ASM Journals Eliminate Impact Factor Information from Journal Websites, Arturo Casadevall, Roger J. Davis, and ASM Journal Editors and Leadership

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The maternal interleukin-17a pathway in mice promotes autism-like phenotypes in offspring, Gloria B. Choi, Yeong S. Yim, Helen Wong, Sangdoo Kim, Hyunju Kim, Sangwon V. Kim, Charles A. Hoeffer, Dan R. Littman, and Jun R. Huh

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CXCR4 identifies transitional bone marrow premonocytes that replenish the mature monocyte pool for peripheral responses, Shu Zhen Chong, Maximilien Evrard, John E. Harris, and Lai Guan Ng

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In Vivo Selection Yields AAV-B1 Capsid for Central Nervous System and Muscle Gene Therapy, Sourav Roy Choudhury, Anne F. Harris, Stacy A. Maitland, Jennifer Ferreira, Shan Ma, Rohit B. Sharma, Laura C. Alonso, Claudio Punzo, Robert M. Kotin, and Miguel Sena-Esteves

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Blood-Derived Extracellular RNA and Platelet Pathobiology: Adding Pieces to a Complex Circulating Puzzle, Lauren Clancy and Jane E. Freedman

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Peptide- and Amine-Modified Glucan Particles for the Delivery of Therapeutic siRNA, Jessica L. Cohen, Yuefei Shen, Myriam Aouadi, Pranitha Vangala, Michaela Tencerova, Shinya U. Amano, Sarah M. Nicoloro, Joseph Yawe, and Michael P. Czech

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Standard Definitions and Common Data Elements for Clinical Trials in Patients With Alcoholic Hepatitis: Recommendation From the NIAAA Alcoholic Hepatitis Consortia, David W. Crabb, Gyongyi Szabo, and NIAAA Alcoholic Hepatitis Consortia

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PGC-1alpha dictates endothelial function through regulation of eNOS expression, Siobhan M. Craige, Swenja Kroller-Schon, Chunying Li, Shashi Kant, Shenghe Cai, Kai Chen, Mayur M. Contractor, Yongmei Pei, Eberhard Schulz, and John F. Keaney Jr.

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Combined Activities of JNK1 and JNK2 in Hepatocytes Protect Against Toxic Liver Injury, Francisco Javier Cubero, Miguel Eugenio Zoubek, Wei Hu, Jin Peng, Gang Zhao, Yulia A. Nevzorova, Malika Al Masaoudi, Lars P. Bechmann, Mark V. Boekschoten, Michael Muller, Christian Preisinger, Nikolaus Gassler, Ali E. Canbay, Tom Luedde, Roger J. Davis, Christian Liedtke, and Christian Trautwein

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IL-10 prevents aging-associated inflammation and insulin resistance in skeletal muscle, Sezin Dagdeviren, Dae Young Jung, Randall H. Friedline, Hye Lim Noh, Jong Hun Kim, Payal R. Patel, Nicholas Tsitsilianos, Kunikazu Inashima, Duy A. Tran, Xiaodi Hu, Marilia M. Loubato, Siobhan M. Craige, Jung Yeon Kwon, Ki Won. Lee, and Jason K. Kim

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Altered Interleukin-10 Signaling in Skeletal Muscle Regulates Obesity-Mediated Inflammation and Insulin Resistance, Sezin Dagdeviren, Dae Young Jung, Eunjung Lee, Randall H. Friedline, Hye Lim Noh, Jong Hun. Kim, Payal R. Patel, Nicholas Tsitsilianos, Andrew V. Tsitsilianos, Duy A. Tran, George H. Tsougranis, Caitlyn C. Kearns, Cecilia P. Uong, Jung Yeon. Kwon, Werner Muller, Ki Won. Lee, and Jason K. Kim

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The mitokine quest(ion), Pan Deng and Cole M. Haynes

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Adipocyte-specific Hypoxia-inducible gene 2 promotes fat deposition and diet-induced insulin resistance, Marina DiStefano, Rachel J. Roth Flach, Ozlem Senol-Cosar, Laura V. Danai, Joseph V. Virbasius, Sarah M. Nicoloro, Juerg R. Straubhaar, Sezin Dagdeviren, Martin Wabitsch, Olga T. Gupta, Jason K. Kim, and Michael P. Czech

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Identifying Nuclear Matrix-Attached DNA Across the Genome, Jason Dobson, Deli Hong, Rasim Barutcu, Hai Wu, Anthony N. Imbalzano, Jane B. Lian, Janet L. Stein, Andre J. Van Wijnen, Jeffrey A. Nickerson, and Gary S. Stein

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Characterization of the platelet transcriptome by RNA sequencing in patients with acute myocardial infarction, John D. Eicher, Yoshiyuki Wakabayashi, Olga Vitseva, Nada Esa, Yanqin Yang, Jun Zhu, Jane Freedman, David D. McManus, and Andrew D. Johnson

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Dietary Betaine Supplementation Increases Fgf21 Levels to Improve Glucose Homeostasis and Reduce Hepatic Lipid Accumulation in Mice, Asma Ejaz, Jason K. Kim, Mary-Elizabeth Patti, and Carles Lerin

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The Transcription Factor ATF5 Mediates a Mammalian Mitochondrial UPR, Christopher J. Fiorese, Anna M. Schulz, Yi-Fan Lin, Nadine Rosin, Mark W. Pellegrino, and Cole M. Haynes

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Emerging evidence for beneficial macrophage functions in atherosclerosis and obesity-induced insulin resistance, Timothy P. Fitzgibbons and Michael P. Czech

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Diverse human extracellular RNAs are widely detected in human plasma, Jane E. Freedman, Eric Mick, Lea M. Beaulieu, Selim E. Tanriverdi, Milka Koupenova-Zamor, Ekaterina Mikhalev, and Kahraman Tanriverdi

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Genetic ablation of lymphocytes and cytokine signaling in nonobese diabetic mice prevents diet-induced obesity and insulin resistance, Randall H. Friedline, Hwi Jin Ko, Dae Young Jung, Yongjin Lee, Rita Bortell, Sezin Dagdeviren, Payal R. Patel, Xiaodi Hu, Kunikazu Inashima, Caitlyn C. Kearns, Nicholas Tsitsilianos, Umber Shafiq, Dale L. Greiner, and Jason K. Kim

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Sexual Dimorphism in Alcohol Induced Adipose Inflammation Relates to Liver Injury, Melissa A. Fulham and Pranoti Mandrekar

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A gene-centered C. elegans protein-DNA interaction network provides a framework for functional predictions, Juan Fuxman Bass, Carles Pons, Lucie Kozlowski, John S. Reece-Hoyes, Shaleen Shrestha, Amy D. Holdorf, Akihiro Mori, Chad L. Myers, and Albertha J. M. Walhout

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Colony Lift Colorimetric Assay for beta-Galactosidase Activity, Juan Fuxman Bass, John S. Reece-Hoyes, and Albertha J. M. Walhout (Cold Spring Harbor protocols, 12-1-2016)

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Gene-Centered Yeast One-Hybrid Assays, Juan Fuxman Bass, John S. Reece-Hoyes, and Albertha J. M. Walhout (Cold Spring Harbor protocols, 12-1-2016)

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Generating Bait Strains for Yeast One-Hybrid Assays, Juan Fuxman Bass, John S. Reece-Hoyes, and Albertha J. M. Walhout (Cold Spring Harbor protocols, 12-1-2016)