Attention GSBS Biochemistry & Molecular Pharmacology students: To submit your publications, go to GSBS Student Publications and click on Submit Research in the left sidebar. You’ll need to log in or create a free account. If you have the article's PubMed ID, submission is very easy. Enter the PubMed ID and information from PubMed will be used to populate the submission form. Questions? Contact Lisa Palmer.
Publications from 2003
siRNA function in RNAi: a chemical modification analysis, Ya-Lin Chiu and Tariq M. Rana
Fusion deficiency induced by mutations at the dimer interface in the Newcastle disease virus hemagglutinin-neuraminidase is due to a temperature-dependent defect in receptor binding, Elizabeth Ann Corey, Anne M. Mirza, Elizabeth Levandowsky, and Ronald M. Iorio
Duplication of U3 sequences in the long terminal repeat of mink cell focus-inducing viruses generates redundancies of transcription factor binding sites important for the induction of thymomas, Nancy L. DiFronzo, Marisa Frieder, Scott A. Loiler, Quynh N. Pham, and Christie A. Holland
Membrane recognition and targeting by lipid-binding domains, Jonathan P. DiNitto, Thomas Charles Cronin, and David G. Lambright
Interaction of the growth hormone receptor with cytokine-induced Src homology domain 2 protein in rat adipocytes, Ling Du, G. Peter Frick, Lih-Ruey Tai, Akihiko Yoshimura, and H. Maurice Goodman
Localization of a beta-actin messenger ribonucleoprotein complex with zipcode-binding protein modulates the density of dendritic filopodia and filopodial synapses, Taesun Eom, Laura N. Antar, Robert H. Singer, and Gary J. Bassell
Visualization of single molecules of mRNA in situ, Andrea M. Femino, Kevin E. Fogarty, Lawrence M. Lifshitz, Walter A. Carrington, and Robert H. Singer
Chromatin remodeling activities act on UV-damaged nucleosomes and modulate DNA damage accessibility to photolyase, Helene Gaillard, Daniel J. Fitzgerald, Corey Lewis Smith, Craig L. Peterson, Timothy J. Richmond, and Fritz Thoma
Local ERM activation and dynamic growth cones at Schwann cell tips implicated in efficient formation of nodes of Ranvier, Cheryl L. Gatto, Barbara J. Walker, and Stephen Lambert
A novel human protein of the maternal centriole is required for the final stages of cytokinesis and entry into S phase, Adam Scott Gromley, Agata Jurczyk, James Sillibourne, Ensar Halilovic, Mette M. Mogensen, Irina Groisman, Maureen Blomberg, and Stephen J. Doxsey
Tumor suppressor pRB functions as a co-repressor of the CCAAT displacement protein (CDP/cut) to regulate cell cycle controlled histone H4 transcription, Sunita Gupta, Mai X. Luong, Sylvia A. Bleuming, Angela Miele, Michael Luong, Daniel W. Young, Erik S. Knudsen, Andre J. Van Wijnen, Janet L. Stein, and Gary S. Stein
In vitro analysis of RNA interference in Drosophila melanogaster, Benjamin Haley, Guiliang Tang, and Phillip D. Zamore
Structural basis for endosomal targeting by FYVE domains, Akira Hayakawa, Susan J. Hayes, Deirdre C. Lawe, Eathiraj Sudharshan, Richard A. Tuft, Kevin E. Fogarty, David Lambright, and Silvia Corvera
Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast, Feng He, Xiangrui Li, Phyllis Spatrick, Ryan Casillo, Shuyun Dong, and Allan Jacobson
Profiling follicle stimulating hormone-induced gene expression changes in normal and malignant human ovarian surface epithelial cells, Shuk-Mei Ho, Kin-Mang Lau, Samuel C. Mok, and Viqar Syed
Correlation between hearing loss and scala media area in guinea pigs with long-standing endolymphatic hydrops, Morgan E. Hott, Martin Graham, Lawrence J. Bonassar, and Cliff A. Megerian
Maintenance of open chromatin and selective genomic occupancy at the cell cycle-regulated histone H4 promoter during differentiation of HL-60 promyelocytic leukemia cells, Hayk Hovhannisyan, Brian C. Cho, Partha Mitra, Martin A. Montecino, Gary S. Stein, Andre J. Van Wijnen, and Janet L. Stein
Chromatin and transcription: histones continue to make their marks, Mariela Jaskelioff and Craig L. Peterson
Rad54p is a chromatin remodeling enzyme required for heteroduplex DNA joint formation with chromatin, Mariela Jaskelioff, Stephen Van Komen, Jocelyn E. Krebs, Patrick Sung, and Craig L. Peterson
Differential gene expression analysis using paraffin-embedded tissues after laser microdissection, Joung-Ok Kim, Hyun-Nam Kim, Mi-Hye Hwang, Hong-In Shin, Shin-Yoon Kim, Rang-Woon Park, Eui-Yun Park, In-San Kim, Andre J. Van Wijnen, Janet L. Stein, Jane B. Lian, Gary S. Stein, and Je-Yong Choi
Alloimmune injury and rejection of human skin grafts on human peripheral blood lymphocyte-reconstituted non-obese diabetic severe combined immunodeficient beta2-microglobulin-null mice, Nicole A. Turgeon, Scott J. Banuelos, Leonard D. Shultz, Bonnie L. Lyons, Neal N. Iwakoshi, Dale L. Greiner, John P. Mordes, Aldo A. Rossini, and Michael C. Appel
Publications from 2002
Expression of estrogen receptor beta in the fetal, neonatal, and prepubertal human prostate, Jason Y. Adams, Irwin Leav, Kin-Mang Lau, Shuk-Mei Ho, and Solveig M.V. Pflueger
SRC-1 and Wnt signaling act together to specify endoderm and to control cleavage orientation in early C. elegans embryos, Yanxia Bei, Jennifer Hogan, Laura A. Berkowitz, Martha C. Soto, Christian Ernest Rocheleau, Ka Ming Pang, John J. Collins, and Craig C. Mello
Increased production of interleukin-8 in primary human monocytes and in human epithelial and endothelial cell lines after dengue virus challenge, Irene Bosch, Kris Xhaja, Luis Estevez, Gregory Raines, Heather J. Melichar, Rajas V. Warke, Marcia V. Fournier, Francis A. Ennis, and Alan L. Rothman
Essential role for the SANT domain in the functioning of multiple chromatin remodeling enzymes, Laurie A. Boyer, Michael R. Langer, Kimberly A. Crowley, Song Tan, John M. Denu, and Craig L. Peterson
Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA, Brent D. Brower-Toland, Corey Lewis Smith, Richard C. Yeh, John T. Lis, Craig L. Peterson, and Michelle D. Wang
Naive B lymphocytes undergo homeostatic proliferation in response to B cell deficit, Mark S. Cabatingan, Madelyn R. Schmidt, Ranjan Sen, and Robert T. Woodland
A tyrosine-phosphorylated 12-amino-acid sequence of enteropathogenic Escherichia coli Tir binds the host adaptor protein Nck and is required for Nck localization to actin pedestals, Kenneth Geno Campellone, Andrew Giese, Donald J. Tipper, and John M. Leong
Human cytomegalovirus immediate early proteins and cell growth control, Jonathan Patrick Castillo and Timothy F. Kowalik
Tat stimulates cotranscriptional capping of HIV mRNA, Ya-Lin Chiu, C. Kiong Ho, Nayanendu Saha, Beate Schwer, Stewart Shuman, and Tariq M. Rana
RNAi in human cells: basic structural and functional features of small interfering RNA, Ya-Lin Chiu and Tariq M. Rana
Cooperative nucleotide binding to the human erythrocyte sugar transporter, Erin K. Cloherty, Kara B. Levine, Christopher A. Graybill, and Anthony Carruthers
1,25-(OH)2-vitamin D3 suppresses the bone-related Runx2/Cbfa1 gene promoter, Hicham Drissi, Arlyssa Pouliot, Christian Koolloos, Janet L. Stein, Jane B. Lian, Gary S. Stein, and Andre J. Van Wijnen
Identification of novel protein/DNA interactions within the promoter of the bone-related transcription factor Runx2/Cbfa1, Hicham Drissi, Arlyssa Pouliot, Janet L. Stein, Andre J. Van Wijnen, Gary S. Stein, and Jane B. Lian
Mechanisms for regulation of cellular responsiveness to human IFN-beta1a, Stefan A. Dupont, Susan E. Goelz, Jaya Goyal, and Marie Green
Viral abrogation of stem cell transplantation tolerance causes graft rejection and host death by different mechanisms, Daron Forman, Raymond M. Welsh, Thomas G. Markees, Bruce A. Woda, John P. Mordes, Aldo A. Rossini, and Dale L. Greiner
Cytokine gene expression and protein production in peripheral blood mononuclear cells of children with acute dengue virus infections, Susan J. Gagnon, Masuko Mori, Ichiro Kurane, Sharone Green, David W. Vaughn, Siripen Kalayanarooj, Saroj Suntayakorn, Francis A. Ennis, and Alan L. Rothman
Redirecting retroviral tropism by insertion of short, nondisruptive peptide ligands into envelope, Timothy J. Gollan and Michael R. Green
Selective targeting and inducible destruction of human cancer cells by retroviruses with envelope proteins bearing short peptide ligands, Timothy J. Gollan and Michael R. Green
RNAi (Nematodes: Caenorhabditis elegans), Alla Grishok and Craig C. Mello
Translational control of the embryonic cell cycle, Irina Groisman, Mi-Young Jung, Madathia Sarkissian, Quiping Cao, and Joel D. Richter
Cytokinesis in eukaryotes, David A. Guertin, Susanne Trautmann, and Dannel McCollum
Dma1 prevents mitotic exit and cytokinesis by inhibiting the septation initiation network (SIN), David A. Guertin, Srinivas Venkatram, K. Lance Gould, and Dannel McCollum
A predominantly nuclear protein affecting cytoplasmic localization of beta-actin mRNA in fibroblasts and neurons, Wei Gu, Feng Pan, Honglai Zhang, Gary J. Bassell, and Robert H. Singer
Transcription factors RUNX1/AML1 and RUNX2/Cbfa1 dynamically associate with stationary subnuclear domains, Kimberly Stacy Harrington, Amjad Javed, Hicham Drissi, Sandra Marie McNeil, Jane B. Lian, Janet L. Stein, Andre J. Van Wijnen, Yu-Li Wang, and Gary S. Stein
TGF beta receptor internalization into EEA1-enriched early endosomes: role in signaling to Smad2, Susan J. Hayes, Anil Chawla, and Silvia Corvera
The death domain kinase RIP protects thymocytes from tumor necrosis factor receptor type 2-induced cell death, Nicole M. Hermance, Sarah R. Oikemus, Elizabeth D. Kilpatrick, Leslie A. Cunningham, and Michelle Kelliher
DNA microarrays in prostate cancer, Shuk-Mei Ho and Kin-Mang Lau
Cytokinesis: myosin spots the ring, Ming-Chin Hou and Dannel McCollum
Mob2p interacts with the protein kinase Orb6p to promote coordination of cell polarity with cell cycle progression, Ming-Chin Hou, David J. Wiley, Fulvia Verde, and Dannel McCollum
N-methyl-D-aspartate receptor signaling results in Aurora kinase-catalyzed CPEB phosphorylation and alpha CaMKII mRNA polyadenylation at synapses, Yi-Shuian Huang, Mi-Young Jung, Madathia Sarkissian, and Joel D. Richter
DOC-2/DAB2 is the binding partner of myosin VI, Akira Inoue, Osamu Sato, Kazuaki Homma, and Mitsuo Ikebe
Integrated channel plasticity contributes to alcohol tolerance in neurohypophysial terminals, Thomas K. Knott, Alejandro M. Dopico, Govindan Dayanithi, Jose R. Lemos, and Steven N. Treistman
Novel functional interactions between Trk kinase and p75 neurotrophin receptor in neuroblastoma cells, Mahesh B. Lachyankar, Peter J. Condon, Marie-Claire Daou, Asit K. De, John B. Levine, Axel Obermeier, and Alonzo H. Ross
Meis family proteins are required for hindbrain development in the zebrafish, Choe Seong-Kyu, Nikolaos Vlachakis, and Charles G. Sagerstrom
Publications from 2001
The Snail protein family regulates neuroblast expression of inscuteable and string, genes involved in asymmetry and cell division in Drosophila, Shovon Imtiaz Ashraf and Y. Tony Ip
Differential regulation of the two principal Runx2/Cbfa1 n-terminal isoforms in response to bone morphogenetic protein-2 during development of the osteoblast phenotype, Chaitali Banerjee, Amjad Javed, Je-Yong Choi, Jack Green, Vicki Rosen, Andre J. Van Wijnen, Janet L. Stein, Jane B. Lian, and Gary S. Stein
Absence of Dbp2p alters both nonsense-mediated mRNA decay and rRNA processing, Andrew T. Bond, David A. Mangus, Feng He, and Allan Jacobson
Nicotinamide adenine dinucleotide (NAD) and its metabolites inhibit T lymphocyte proliferation: role of cell surface NAD glycohydrolase and pyrophosphatase activities, Rita Bortell, Joel Moss, Robert C. McKenna, Mark R. Rigby, Dena Niedzwiecki, Linda A. Stevens, Walter A. Patton, John P. Mordes, Dale L. Greiner, and Aldo A. Rossini
Levels of Art2+ cells but not soluble Art2 protein correlate with expression of autoimmune diabetes in the BB rat, Rita Bortell, Debra J. Waite, Barbara J. Whalen, Derrick James Todd, Jean H. Leif, Elena Lesma, Joel Moss, John P. Mordes, Aldo A. Rossini, and Dale L. Greiner
Cell-cycle arrest in TrkA-expressing NIH3T3 cells involves nitric oxide synthase, Dylan A. Bulseco, Wojciech Poluha, Christopher M. Schonhoff, Marie-Claire Daou, Peter J. Condon, and Alonzo H. Ross
xid mice reveal the interplay of homeostasis and Bruton's tyrosine kinase-mediated selection at multiple stages of B cell development, Michael P. Cancro, Alex P. Sah, Sherri L. Levy, David M. Allman, Madelyn R. Schmidt, and Robert T. Woodland
Injection molding of chondrocyte/alginate constructs in the shape of facial implants, Sophia C. N. Chang, Jon A. Rowley, Geoffrey Tobias, Nicholas G. Genes, Amit K. Roy, David J. Mooney, Charles A. Vacanti, and Lawrence J. Bonassar
Memory CD8+ T cells in heterologous antiviral immunity and immunopathology in the lung, Hong D. Chen, Armando E. Fraire, Isabelle Joris, Michael A. Brehm, Raymond M. Welsh, and Liisa K. Selin
HIV-1 Tat protein interacts with mammalian capping enzyme and stimulates capping of TAR RNA, Ya-Lin Chiu, Elizabeth Coronel, C. Kiong Ho, Stewart Shuman, and Tariq M. Rana
Multivalent endosome targeting by homodimeric EEA1, John J. Dumas, Eric Lee Merithew, Eathiraj Sudharshan, Deepa Rajamani, Susan J. Hayes, Deirdre C. Lawe, Silvia Corvera, and David G. Lambright
Expression of the osteoblast differentiation factor RUNX2 (Cbfa1/AML3/Pebp2alpha A) is inhibited by tumor necrosis factor-alpha, Linda C. Gilbert, Xiaofei He, Paul K. Farmer, Janet Rubin, Hicham Drissi, Andre J. Van Wijnen, Jane B. Lian, Gary S. Stein, and Mark S. Nanes
Pteridine reductase mechanism correlates pterin metabolism with drug resistance in trypanosomatid parasites, David G. Gourley, Alexander W. Schuttelkopf, Gordon A. Leonard, James Luba, Larry W. Hardy, Stephen M. Beverley, and William N. Hunter
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing, Alla Grishok, Amy E. Pasquinelli, Darryl Conte Jr., Na Li, Susan Parrish, Ilho Ha, David L. Baillie, Andrew Z. Fire, Gary Ruvkun, and Craig C. Mello
Interaction between the noncatalytic region of Sid1p kinase and Cdc14p is required for full catalytic activity and localization of Sid1p, David A. Guertin and Dannel McCollum
CCAAT/enhancer-binding proteins (C/EBP) beta and delta activate osteocalcin gene transcription and synergize with Runx2 at the C/EBP element to regulate bone-specific expression, Soraya E. Gutierrez, Amjad Javed, Daniel K. Tennant, Monique van Rees, Martin A. Montecino, Gary S. Stein, Janet L. Stein, and Jane B. Lian
Motor function and regulation of myosin X, Kazuaki Homma, Junya Saito, Reiko Ikebe, and Mitsuo Ikebe
The core of the motor domain determines the direction of myosin movement, Kazuaki Homma, Misako Yoshimura, Junya Saito, Reiko Ikebe, and Mitsuo Ikebe
Skin allograft maintenance in a new synchimeric model system of tolerance, Neal N. Iwakoshi, Thomas G. Markees, Nicole A. Turgeon, Thomas B. Thornley, Amy Cuthbert, Jean Leif, Nancy E. Phillips, John P. Mordes, Dale L. Greiner, and Aldo A. Rossini
Human RAD52 exhibits two modes of self-association, Wasantha Ranatunga, Doba Jackson, Janice A. Lloyd, Anthony L. Forget, Kendall L. Knight, and Gloria E. O. Borgstahl
Publications from 2000
A profound deficiency in thymic progenitor cells in mice lacking Jak3, Allison Michelle Baird, Julie Ann Lucas, and Leslie J. Berg
Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes, Laurie A. Boyer, Colin Logie, Edgar Bonte, Peter B. Becker, Paul A. Wade, Alan P. Wolffe, Carl Wu, Anthony N. Imbalzano, and Craig L. Peterson
Actin-related proteins (Arps): conformational switches for chromatin-remodeling machines, Laurie A. Boyer and Craig L. Peterson
Roles of the histone H2A-H2B dimers and the (H3-H4)(2) tetramer in nucleosome remodeling by the SWI-SNF complex, Laurie A. Boyer, Xiao Shao, Richard H. Ebright, and Craig L. Peterson
Role of human cytomegalovirus immediate-early proteins in cell growth control, Jonathan Patrick Castillo, Andrew D. Yurochko, and Timothy F. Kowalik
JNK1 is required for T cell-mediated immunity against Leishmania major infection, Stephanie L. Constant, Chen Dong, Derek D. Yang, Mark Allen Wysk, Roger J. Davis, and Richard A. Flavell
The kinetic mechanism of the hairpin ribozyme in vivo: influence of RNA helix stability on intracellular cleavage kinetics, Christine Patricia Donahue, Ramesh S. Yadava, Steven M. Nesbitt, and Martha J. Fedor
Transcriptional autoregulation of the bone related CBFA1/RUNX2 gene, Hicham Drissi, Quyen Luc, A. Rauf Shakoori, Susana Chuva De Sousa Lopes, Je-Yong Choi, Anne Terry, Ming Hu, Stephen N. Jones, James C. Neil, Jane B. Lian, Janet L. Stein, Andre J. Van Wijnen, and Gary S. Stein
Molecular determinants that mediate selective activation of p38 MAP kinase isoforms, Herve Enslen, Deborah Marie Brancho, and Roger J. Davis
A role for the lissencephaly gene LIS1 in mitosis and cytoplasmic dynein function, Nicole E. Faulkner, Denis L. Dujardin, Chin-Yin Tai, Kevin T. Vaughan, Christopher B. O'Connell, Yu-Li Wang, and Richard B. Vallee
Modified intranuclear organization of regulatory factors in human acute leukemias: reversal after treatment, Jeffrey A. Gordon, Shirwin M. Pockwinse, F. Marc Stewart, Peter J. Quesenberry, Tatsuya Nakamura, Carlo M. Croce, Jane B. Lian, Janet L. Stein, Andre J. Van Wijnen, and Gary S. Stein
Genetic requirements for inheritance of RNAi in C. elegans, Alla Grishok, Hiroaki Tabara, and Craig C. Mello
The role of the sid1p kinase and cdc14p in regulating the onset of cytokinesis in fission yeast, David A. Guertin, Louise Chang, Farid Irshad, K. Lance Gould, and Dannel McCollum
ATP-dependent substrate occlusion by the human erythrocyte sugar transporter, Karen Schray Heard, Nancy J. Fidyk, and Anthony Carruthers
Snail/slug family of repressors: slowly going into the fast lane of development and cancer, Kirugaval Hemavathy, Shovon Imtiaz Ashraf, and Y. Tony Ip
Expression screening of factors binding to the osteocalcin bone-specific promoter element OC box I: isolation of a novel osteoblast differentiation-specific factor, Heidi M. Hoffmann, Jack Green, Andre J. Van Wijnen, Janet L. Stein, Gary S. Stein, and Jane B. Lian
Mob1p interacts with the Sid2p kinase and is required for cytokinesis in fission yeast, Ming-Chin Hou, Jeffrey Salek, and Dannel McCollum
SWI-SNF-mediated nucleosome remodeling: role of histone octamer mobility in the persistence of the remodeled state, Mariela Jaskelioff, Igor M. Gavin, Craig L. Peterson, and Colin Logie
Groucho/TLE/R-esp proteins associate with the nuclear matrix and repress RUNX (CBF(alpha)/AML/PEBP2(alpha)) dependent activation of tissue-specific gene transcription, Amjad Javed, Bo Guo, Scott W. Hiebert, Je-Yong Choi, Jack Green, Shan-Chuan Zhao, Mark A. Osborne, Stefano Stifani, Janet L. Stein, Jane B. Lian, Andre J. Van Wijnen, and Gary S. Stein
Tolerance to acute ethanol inhibition of peptide hormone release in the isolated neurohypophysis, Thomas K. Knott, Govindan Dayanithi, Vincent Coccia, Edward E. Custer, Jose R. Lemos, and Steven N. Treistman
A role for nuclear PTEN in neuronal differentiation, Mahesh B. Lachyankar, Nazneen Sultana, Christopher M. Schonhoff, Prasenjit Mitra, Wojciech Poluha, Stephen Lambert, Peter J. Quesenberry, N. Scott Litofsky, Lawrence D. Recht, Roya Nabi, Susan J. Miller, Shinji Ohta, Benjamin G. Neel, and Alonzo H. Ross
Marrow transplantation and targeted gene therapy to the skeleton, Jane B. Lian, Gary S. Stein, Janet L. Stein, and Andre J. Van Wijnen
Transcriptional control of osteoblast differentiation, Jane B. Lian, Gary S. Stein, Janet L. Stein, and Andre J. Van Wijnen
Altered expression of BRCA1, BRCA2, and a newly identified BRCA2 exon 12 deletion variant in malignant human ovarian, prostate, and breast cancer cell lines, Christine Rauh-Adelmann, Kin-Mang Lau, Nari Sabeti, John P. Long, Samuel C. Mok, and Shuk-Mei Ho
Sensitivity of bacteriophage RB69 DNA polymerase to N2-(p-n-butylphenyl)-2'-deoxyguanosine nucleotides, James Michael Walker Stattel and George E. Wright