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<title>Andreadis Lab</title>
<copyright>Copyright (c) 2013 University of Massachusetts Medical School All rights reserved.</copyright>
<link>http://escholarship.umassmed.edu/andreadis</link>
<description>Recent documents in Andreadis Lab</description>
<language>en-us</language>
<lastBuildDate>Wed, 13 Feb 2013 16:00:50 PST</lastBuildDate>
<ttl>3600</ttl>








<item>
<title>Saitohin, which is nested within the tau gene, interacts with tau and Abl and its human-specific allele influences Abl phosphorylation</title>
<link>http://escholarship.umassmed.edu/andreadis/23</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/23</guid>
<pubDate>Fri, 30 Mar 2012 06:42:22 PDT</pubDate>
<description>
	<![CDATA[
	<p>Saitohin (STH) is a gene unique to humans and their closest relatives whose function is not yet known. STH contains a single polymorphism (Q7R); the Q allele is human-specific and confers susceptibility to several neurodegenerative diseases. In previous work, we discovered that STH interacts with Peroxiredoxin 6 (Prdx6), a unique member of that family which is bifunctional and whose levels increase in Pick's disease. In this study, we report that STH also interacts with tau and the non-receptor tyrosine kinase c-Abl (Abl). Furthermore, Abl phosphorylates STH on its single tyrosine residue and STH increases tyrosine phosphorylation by Abl. The effect of Saitohin on Abl-mediated phosphorylation appears to be allele-specific, providing evidence for a new cellular function for STH.</p>

	]]>
</description>

<author>Yan Wang et al.</author>


<category>Alleles</category>

<category>Amino Acid Sequence</category>

<category>Base Sequence</category>

<category>Blotting, Western</category>

<category>Humans</category>

<category>Immunoprecipitation</category>

<category>Molecular Sequence Data</category>

<category>Phosphorylation</category>

<category>Protein Binding</category>

<category>Proto-Oncogene Proteins c-abl</category>

<category>Reverse Transcriptase Polymerase Chain Reaction</category>

<category>tau Proteins</category>

</item>






<item>
<title>An SRp75/hnRNPG Complex Interacting with hnRNPE2 Regulates the 5&apos; Splice Site of Tau Exon 10, Whose Misregulation Causes Frontotemporal Dementia</title>
<link>http://escholarship.umassmed.edu/andreadis/22</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/22</guid>
<pubDate>Thu, 29 Mar 2012 13:14:11 PDT</pubDate>
<description>
	<![CDATA[
	<p>Tau is a neuronal-specific microtubule-associated protein that plays an important role in establishing neuronal polarity and maintaining the axonal cytoskeleton. Aggregated tau is the major component of neurofibrillary tangles (NFTs), structures present in the brains of people affected by neurodegenerative diseases called tauopathies. Tauopathies include Alzheimer's disease (AD), frontotemporal dementia with Parkinsonism (FTDP-17), the early onset dementia observed in Down syndrome (DS; trisomy 21) and the dementia component of myotonic dystrophy type 1 (DM1). Splicing misregulation of adult-specific exon 10, which codes for a microtubule binding domain, results in expression of abnormal ratios of tau isoforms, leading to FTDP-17. Positions 3 to 19 of the intron downstream of exon 10 define a hotspot of splicing regulation: the region diverges between humans and rodents, and point mutations within it result in tauopathies. In this study, we investigated three regulators of exon 10 splicing: serine/arginine-rich protein SRp75 and heterogeneous nuclear ribonucleoproteins hnRNPG and hnRNPE2. SRp75 and hnRNPG inhibit splicing of exon 10 whereas hnRNPE2 activates it. Using co-transfections, co-immunoprecipitations and RNAi we discovered that SRp75 binds to the proximal downstream intron of tau exon 10 at the FTDP-17 hotspot region; and that hnRNPG and hnRNPE2 interact with SRp75. Thus, increased exon 10 inclusion in FTDP mutants may arise from weakened SRp75 binding. This work provides insights into the splicing regulation of the tau gene and into possible strategies for correcting the imbalance in tauopathies caused by changes in the ratio of exon 10.</p>

	]]>
</description>

<author>Yan Wang et al.</author>


<category>Alternative Splicing</category>

<category>Alzheimer Disease</category>

<category>Animals</category>

<category>Base Sequence</category>

<category>Brain</category>

<category>COS Cells</category>

<category>Cells, Cultured</category>

<category>Cercopithecus aethiops</category>

<category>*Exons</category>

<category>Frontotemporal Dementia</category>

<category>Gene Expression Regulation</category>

<category>HeLa Cells</category>

<category>Heterogeneous-Nuclear Ribonucleoproteins</category>

<category>Humans</category>

<category>Immunoprecipitation</category>

<category>Introns</category>

<category>Molecular Sequence Data</category>

<category>Neurons</category>

<category>Parkinsonian Disorders</category>

<category>*RNA Splice Sites</category>

<category>RNA-Binding Proteins</category>

<category>Sequence Analysis, DNA</category>

<category>Tauopathies</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau Splicing and the Intricacies of Dementia</title>
<link>http://escholarship.umassmed.edu/andreadis/21</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/21</guid>
<pubDate>Thu, 29 Mar 2012 13:14:07 PDT</pubDate>
<description>
	<![CDATA[
	<p>Tau is a microtubule-associated protein that fulfills several functions critical for neuronal formation and health. Tau discharges its functions by producing multiple isoforms via regulated alternative splicing. These isoforms modulate tau function in normal brain by altering the domains of the protein, thereby influencing its localization, conformation, and post-translational modifications and hence its availability and affinity for microtubules and other ligands. Disturbances in tau expression result in disruption of the neuronal cytoskeleton and formation of tau structures (neurofibrillary tangles) found in brains of dementia sufferers. More specifically, aberrations in tau splicing regulation directly cause several neurodegenerative diseases, which lead to dementia. In this review, I present our cumulative knowledge of tau splicing regulation in connection with neurodegeneration and also briefly go over the still-extensive list of questions that are connected to tau (dys)function. J. Cell. Physiol. 227: 1220-1225, 2012. (c) 2011 Wiley Periodicals, Inc.</p>

	]]>
</description>

<author>Athena Andreadis</author>


<category>Alternative Splicing</category>

<category>tau Proteins</category>

<category>Neurodegenerative Diseases</category>

</item>






<item>
<title>Pathogenic forms of tau inhibit kinesin-dependent axonal transport through a mechanism involving activation of axonal phosphotransferases</title>
<link>http://escholarship.umassmed.edu/andreadis/20</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/20</guid>
<pubDate>Thu, 29 Mar 2012 13:14:02 PDT</pubDate>
<description>
	<![CDATA[
	<p>Aggregated filamentous forms of hyperphosphorylated tau (a microtubule-associated protein) represent pathological hallmarks of Alzheimer's disease (AD) and other tauopathies. While axonal transport dysfunction is thought to represent a primary pathogenic factor in AD and other neurodegenerative diseases, the direct molecular link between pathogenic forms of tau and deficits in axonal transport remain unclear. Recently, we demonstrated that filamentous, but not soluble, forms of wild-type tau inhibit anterograde, kinesin-based fast axonal transport (FAT) by activating axonal protein phosphatase 1 (PP1) and glycogen synthase kinase 3 (GSK3), independent of microtubule binding. Here, we demonstrate that amino acids 2-18 of tau, comprising a phosphatase-activating domain (PAD), are necessary and sufficient for activation of this pathway in axoplasms isolated from squid giant axons. Various pathogenic forms of tau displaying increased exposure of PAD inhibited anterograde FAT in squid axoplasm. Importantly, immunohistochemical studies using a novel PAD-specific monoclonal antibody in human postmortem tissue indicated that increased PAD exposure represents an early pathogenic event in AD that closely associates in time with AT8 immunoreactivity, an early marker of pathological tau. We propose a model of pathogenesis in which disease-associated changes in tau conformation lead to increased exposure of PAD, activation of PP1-GSK3, and inhibition of FAT. Results from these studies reveal a novel role for tau in modulating axonal phosphotransferases and provide a molecular basis for a toxic gain-of-function associated with pathogenic forms of tau.</p>

	]]>
</description>

<author>Nicholas M. Kanaan et al.</author>


<category>Alzheimer Disease</category>

<category>Analysis of Variance</category>

<category>Animals</category>

<category>Axonal Transport</category>

<category>Axons</category>

<category>Brain</category>

<category>Decapodiformes</category>

<category>Enzyme Inhibitors</category>

<category>Enzyme-Linked Immunosorbent Assay</category>

<category>Glycogen Synthase Kinase 3</category>

<category>Humans</category>

<category>Kinesin</category>

<category>Models, Biological</category>

<category>Mutagenesis</category>

<category>Peptide Fragments</category>

<category>Phosphorus Isotopes</category>

<category>Phosphotransferases</category>

<category>Proto-Oncogene Proteins c-jun</category>

<category>Receptors, Neuropeptide Y</category>

<category>Signal Transduction</category>

<category>Tauopathies</category>

<category>tau Proteins</category>

</item>






<item>
<title>Phosphorylation in the amino terminus of tau prevents inhibition of anterograde axonal transport</title>
<link>http://escholarship.umassmed.edu/andreadis/19</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/19</guid>
<pubDate>Thu, 29 Mar 2012 13:13:57 PDT</pubDate>
<description>
	<![CDATA[
	<p>Alzheimer's disease (AD) and other tauopathies are characterized by fibrillar inclusions composed of the microtubule-associated protein, tau. Recently, we demonstrated that the N-terminus of tau (amino acids [aa] 2-18) in filamentous aggregates or N-terminal tau isoforms activate a signaling cascade involving protein phosphatase 1 and glycogen synthase kinase 3 that results in inhibition of anterograde fast axonal transport (FAT). We have termed the functional motif comprised of aa 2-18 in tau the phosphatase-activating domain (PAD). Here, we show that phosphorylation of tau at tyrosine 18, which is a fyn phosphorylation site within PAD, prevents inhibition of anterograde FAT induced by both filamentous tau and 6D tau. Moreover, Fyn-mediated phosphorylation of tyrosine 18 is reduced in disease-associated forms of tau (e.g., tau filaments). A novel PAD-specific monoclonal antibody revealed that exposure of PAD in tau occurs before and more frequently than tyrosine 18 phosphorylation in the evolution of tangle formation in AD. These results indicate that N-terminal phosphorylation may constitute a regulatory mechanism that controls tau-mediated inhibition of anterograde FAT in AD.</p>

	]]>
</description>

<author>Nicholas M. Kanaan et al.</author>


<category>tau Proteins</category>

<category>Phosphorylation</category>

<category>Axonal Transport</category>

</item>






<item>
<title>C6 pyridinium ceramide influences alternative pre-mRNA splicing by inhibiting protein phosphatase-1</title>
<link>http://escholarship.umassmed.edu/andreadis/18</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/18</guid>
<pubDate>Mon, 09 Jan 2012 12:35:13 PST</pubDate>
<description>
	<![CDATA[
	<p>Alternative pre-mRNA processing is a central element of eukaryotic gene regulation. The cell frequently alters the use of alternative exons in response to physiological stimuli. Ceramides are lipid-signaling molecules composed of sphingosine and a fatty acid. Previously, water-insoluble ceramides were shown to change alternative splicing and decrease SR-protein phosphorylation by activating protein phosphatase-1 (PP1). To gain further mechanistical insight into ceramide-mediated alternative splicing, we analyzed the effect of C6 pyridinium ceramide (PyrCer) on alternative splice site selection. PyrCer is a water-soluble ceramide analog that is under investigation as a cancer drug. We found that PyrCer binds to the PP1 catalytic subunit and inhibits the dephosphorylation of several splicing regulatory proteins containing the evolutionarily conserved RVxF PP1-binding motif (including PSF/SFPQ, Tra2-beta1 and SF2/ASF). In contrast to natural ceramides, PyrCer promotes phosphorylation of splicing factors. Exons that are regulated by PyrCer have in common suboptimal splice sites, are unusually short and share two 4-nt motifs, GAAR and CAAG. They are dependent on PSF/SFPQ, whose phosphorylation is regulated by PyrCer. Our results indicate that lipids can influence pre-mRNA processing by regulating the phosphorylation status of specific regulatory factors, which is mediated by protein phosphatase activity.</p>

	]]>
</description>

<author>Chiranthani Sumanasekera et al.</author>


<category>Ceramides</category>

<category>Alternative Splicing</category>

<category>RNA Precursors</category>

<category>Protein Phosphatase 1</category>

<category>Enzyme Inhibitors</category>

<category>Pyridinium Compounds</category>

</item>






<item>
<title>Transcriptional regulation of the mouse microtubule-associated protein tau</title>
<link>http://escholarship.umassmed.edu/andreadis/15</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/15</guid>
<pubDate>Thu, 30 Sep 2010 08:59:28 PDT</pubDate>
<description>
	<![CDATA[
	<p>The microtubule-associated protein (MAP) tau is found primarily in neurons and errors in its regulation are associated with Alzheimer's disease and other neurodegenerative disorders. Tau expression is transcriptionally regulated and tissue-specific. In this study, starting with a approximately 7500-bp fragment from the mouse tau gene, which includes tau exon -1, we define regions preferentially conferring tissue-specific expression. Furthermore, gel shift assays indicate that transcriptional regulators SP-1 and AP-2 are important for basal expression but not necessary for neuron-specific expression of the tau transcript.</p>

	]]>
</description>

<author>Lei Gao et al.</author>


<category>Animals</category>

<category>Base Sequence</category>

<category>Gene Expression Regulation</category>

<category>Humans</category>

<category>Mice</category>

<category>Microtubules</category>

<category>Molecular Sequence Data</category>

<category>Promoter Regions, Genetic</category>

<category>Rats</category>

<category>Sequence Alignment</category>

<category>Transcription, Genetic</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau gene alternative splicing: expression patterns, regulation and modulation of function in normal brain and neurodegenerative diseases</title>
<link>http://escholarship.umassmed.edu/andreadis/16</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/16</guid>
<pubDate>Thu, 30 Sep 2010 08:59:28 PDT</pubDate>
<description>
	<![CDATA[
	<p>Organization of cytoskeletal elements is critical for cellular migration and maintenance of morphology. Tau protein, which binds to and organizes microtubules, is instrumental in forming and maintaining the neuronal axon. Disturbances in tau expression result in disruption of the neuronal cytoskeleton and formation of pathological tau structures (neurofibrillary tangles, NFTs) found in brains of dementia sufferers. Null tau mice, although viable, exhibit developmental and cognitive defects and transgenic mice which overexpress tau develop severe neuropathies. The neuron-specific tau transcript produces multiple isoforms by intricately regulated alternative splicing. These isoforms modulate tau function in normal brain. Moreover, aberrations in tau splicing regulation directly cause several neurodegenerative diseases. Thus, tau splicing regulation is vital to neuronal health and correct brain function. This review briefly presents our cumulative knowledge of tau splicing-cis elements and trans factors which influence it at the RNA level, its effect on the structure and roles of the tau protein and its repercussions on neuronal morphology and neurodegeneration.</p>

	]]>
</description>

<author>Athena Andreadis</author>


<category>*Alternative Splicing</category>

<category>Amino Acid Sequence</category>

<category>Animals</category>

<category>Base Sequence</category>

<category>Brain</category>

<category>Gene Expression Regulation</category>

<category>Humans</category>

<category>Mice</category>

<category>Molecular Sequence Data</category>

<category>Neurodegenerative Diseases</category>

<category>Protein Isoforms</category>

<category>tau Proteins</category>

</item>






<item>
<title>Identification, expression analysis, genomic organization and cellular location of a novel protein with a RhoGEF domain</title>
<link>http://escholarship.umassmed.edu/andreadis/13</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/13</guid>
<pubDate>Thu, 30 Sep 2010 08:59:27 PDT</pubDate>
<description>
	<![CDATA[
	<p>In this study we describe the identification and characterization of a novel cytosolic protein of the guanine exchange factor (GEF) family. The human cDNA corresponds to predicted human protein FLJ00128/FLJ10357 located on chromosome 14q11.2. The deduced protein sequence contains in its C-terminus a RhoGEF domain followed by a pleckstrin domain. Its N-terminus, central region and RhoGEF/pleckstrin domain are homologous to the recently identified zebrafish Quattro protein, which is involved in morphogenetic movements mediated by the actin cytoskeleton. Based on the homology of our protein's RhoGEF domain to the RhoGEF domains of Trio, Duo and Duet and its homology with Quattro, we named it Solo. The Solo mRNA is ubiquitously expressed but enriched in brain, its expression peaks perinatally and it undergoes extensive alternative splicing. In both myoblasts and neuroblastoma cells, the Solo protein is concentrated around the nucleus.</p>

	]]>
</description>

<author>Sze-Wah Tse et al.</author>


<category>Amino Acid Sequence</category>

<category>Animals</category>

<category>Blood Proteins</category>

<category>Blotting, Northern</category>

<category>Blotting, Western</category>

<category>Brain</category>

<category>Carrier Proteins</category>

<category>Cell Line</category>

<category>Cell Line, Tumor</category>

<category>Cloning, Molecular</category>

<category>Cytoplasm</category>

<category>DNA, Complementary</category>

<category>Exons</category>

<category> *Gene Expression Profiling</category>

<category>Guanine Nucleotide Exchange Factors</category>

<category>Humans</category>

<category>Immunohistochemistry</category>

<category>Immunoprecipitation</category>

<category>Introns</category>

<category>Male</category>

<category>Mice</category>

<category>Molecular Sequence Data</category>

<category>Phosphoproteins</category>

<category>Protein Binding</category>

<category>RNA, Messenger</category>

<category>Rats</category>

<category>Reverse Transcriptase Polymerase Chain Reaction</category>

<category>Saccharomyces cerevisiae</category>

<category>Sequence Alignment</category>

<category>Sequence Analysis, DNA</category>

<category>Sequence Homology, Amino Acid</category>

<category>Two-Hybrid System Techniques</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau exons 2 and 10, which are misregulated in neurodegenerative diseases, are partly regulated by silencers which bind a SRp30c.SRp55 complex that either recruits or antagonizes htra2beta1</title>
<link>http://escholarship.umassmed.edu/andreadis/14</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/14</guid>
<pubDate>Thu, 30 Sep 2010 08:59:27 PDT</pubDate>
<description>
	<![CDATA[
	<p>Tau is a microtubule-associated protein whose transcript undergoes complex regulated splicing in the mammalian nervous system. Exon 2 modulates the tau N-terminal domain, which interacts with the axonal membrane. Exon 10 codes for a microtubule binding domain, increasing the affinity of tau for microtubules. Both exons are excluded from fetal brain, but their default behavior is inclusion, suggesting that silencers are involved in their regulation. Exon 2 is significantly reduced in myotonic dystrophy type 1, whose symptoms include dementia. Mutations that affect exon 10 splicing cause frontotemporal dementia (FTDP). In this study, we investigated three regulators of exon 2 and 10 splicing: serine/arginine-rich (SR) proteins SRp55, SRp30c, and htra2beta1. The first two inhibit both exons; htra2beta1 inhibits exon 2 but activates exon 10. By deletion analysis, we identified splicing silencers located at the 5' end of each exon. Furthermore, we demonstrated that SRp30c and SRp55 bind to both silencers and to each other. In exon 2, htra2beta1 binds to the inhibitory heterodimer through its RS1 domain but not to exon 2, whereas in exon 10 the heterodimer may sterically interfere with htra2beta1 binding to a purine-rich enhancer (defined by FTDP mutation E10-Delta5 = Delta280K) directly downstream of the silencer. Increased exon 10 inclusion in FTDP mutant ENH (N279K) may arise from abolishing SRp30c binding. Also, htra2beta3, a naturally occurring variant of htra2beta1, no longer inhibits exon 2 splicing but can partially rescue splicing of exon 10 in FTDP mutation E10-Delta5. This work provides interesting insights into the splicing regulation of the tau gene.</p>

	]]>
</description>

<author>Yingzi Wang et al.</author>


<category>Animals</category>

<category> *Exons</category>

<category>Gene Expression Regulation</category>

<category>Hela Cells</category>

<category>Humans</category>

<category>Multiprotein Complexes</category>

<category>Mutation</category>

<category>Nerve Tissue Proteins</category>

<category>Neurodegenerative Diseases</category>

<category>Nuclear Proteins</category>

<category>Phosphoproteins</category>

<category> *RNA Splicing</category>

<category>RNA-Binding Proteins</category>

<category>Recombinant Fusion Proteins</category>

<category> *Silencer Elements, Transcriptional</category>

<category>tau Proteins</category>

</item>






<item>
<title>Saitohin, which is nested in the tau locus and confers allele-specific susceptibility to several neurodegenerative diseases, interacts with peroxiredoxin 6</title>
<link>http://escholarship.umassmed.edu/andreadis/12</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/12</guid>
<pubDate>Thu, 30 Sep 2010 08:59:26 PDT</pubDate>
<description>
	<![CDATA[
	<p>Saitohin is a gene unique to humans and their closest relatives, the function of which is not yet known. Saitohin contains a single polymorphism (Q7R), and its Q and R alleles belong to the H1 and H2 tau haplotype, respectively. The Saitohin Q allele confers susceptibility to several neurodegenerative diseases. To get a handle on Saitohin function, we used it as a bait in a yeast two-hybrid screen. By this assay and subsequent co-immunoprecipitation and glutathione S-transferase pull-down assays, we discovered and confirmed that Saitohin interacts with peroxiredoxin 6, a unique member of that family that is bifunctional and the levels of which increase in Pick disease. The strength of the interaction appeared to be allele-specific, giving the first distinction between the two forms of Saitohin.</p>

	]]>
</description>

<author>Lei Gao et al.</author>


<category>Alleles</category>

<category>Animals</category>

<category>Base Sequence</category>

<category>COS Cells</category>

<category>Cell Line</category>

<category>Cercopithecus aethiops</category>

<category>DNA</category>

<category>Haplotypes</category>

<category>Heredodegenerative Disorders, Nervous</category>

<category>System</category>

<category>Humans</category>

<category>Peroxidases</category>

<category>Peroxiredoxin VI</category>

<category>Peroxiredoxins</category>

<category>Pick Disease of the Brain</category>

<category>RNA Splicing</category>

<category>Recombinant Fusion Proteins</category>

<category>Two-Hybrid System Techniques</category>

<category>tau Proteins</category>

</item>






<item>
<title>Misregulation of tau alternative splicing in neurodegeneration and dementia</title>
<link>http://escholarship.umassmed.edu/andreadis/10</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/10</guid>
<pubDate>Thu, 30 Sep 2010 08:59:25 PDT</pubDate>
<description>
	<![CDATA[
	<p>Tau is a microtubule-associated protein that fulfills several functions critical for neuronal formation and health. Tau discharges its functions by producing multiple isoforms via intricately regulated alternative splicing. These isoforms modulate tau function in normal brain by altering the domains of the protein, thereby influencing its conformation and post-translational modifications and hence its affinity for microtubules and other ligands. Disturbances in tau expression result in disruption of the neuronal cytoskeleton and formation of pathological tau structures (neurofibrillary tangles) found in brains of dementia sufferers. More specifically, aberrations in tau splicing regulation directly cause several neurodegenerative diseases that lead to dementia. This review briefly presents our cumulative knowledge of tau splicing regulation in connection with the alterations in tau splicing seen in neurodegeneration.</p>

	]]>
</description>

<author>Athena Andreadis</author>


<category>Alternative Splicing</category>

<category>Base Sequence</category>

<category>Dementia</category>

<category>Exons</category>

<category>Humans</category>

<category>Molecular Sequence Data</category>

<category>Nerve Degeneration</category>

<category>RNA, Messenger</category>

<category>tau Proteins</category>

</item>






<item>
<title>Expression profiles of genes in DJ-1-knockdown and L 166 P DJ-1 mutant cells</title>
<link>http://escholarship.umassmed.edu/andreadis/11</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/11</guid>
<pubDate>Thu, 30 Sep 2010 08:59:25 PDT</pubDate>
<description>
	<![CDATA[
	<p>DJ-1 is a novel oncogene and a causative gene for the familial form of Parkinson's disease (PD). DJ-1 has been shown to play roles in anti-oxidative stress by eliminating reactive oxygen species and in transcriptional regulation of genes. Loss of these functions of DJ-1 is thought to trigger the onset of PD. In this study, to identify genes for which expressions are regulated by DJ-1, DNA microarray analyses were carried out using two mouse NIH3T3 cell lines, DJ-1-knockdown cells and cells harboring an exogenously added L 166 P DJ-1 mutant found in PD patients. In both cell lines, drastic changes in expressions of genes, including genes related to stress, apoptosis, oxidative stress and neurotoxicity, were observed and changes in expressions were confirmed by RT-PCR. Of the genes identified, expression level of the extracellular superoxide dismutase (SOD 3) gene was found to decrease in DJ-1-knockdown cells, while expressions of SOD 1 and SOD 2 genes did not change. Furthermore, expression of the tau gene, a gene whose product gives cells neurotoxicity by aggregation, was found to increase at its promoter level in L 166 P DJ-1 cells. These findings suggest that DJ-1 regulates expressions of genes for which functions are thought to be related to cell death or neurodegeneration.</p>

	]]>
</description>

<author>Hiromi Nishinaga et al.</author>


<category>Amino Acid Substitution</category>

<category>Animals</category>

<category>Gene Expression Regulation</category>

<category>Gene Silencing</category>

<category>Mice</category>

<category>Mutation</category>

<category>NIH 3T3 Cells</category>

<category>Oncogene Proteins</category>

<category>Structure-Activity Relationship</category>

<category>Superoxide Dismutase</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau protects microtubules in the axon from severing by katanin</title>
<link>http://escholarship.umassmed.edu/andreadis/8</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/8</guid>
<pubDate>Thu, 30 Sep 2010 08:59:24 PDT</pubDate>
<description>
	<![CDATA[
	<p>Microtubules in the axon are more resistant to severing by katanin than microtubules elsewhere in the neuron. We have hypothesized that this is because of the presence of tau on axonal microtubules. When katanin is overexpressed in fibroblasts, the microtubules are severed into short pieces, but this phenomenon is suppressed by the coexpression of tau. Protection against severing is also afforded by microtubule-associated protein 2 (MAP2), which has a tau-like microtubule-binding domain, but not by MAP1b, which has a different microtubule-binding domain. The microtubule-binding domain of tau is required for the protection, but within itself, provides less protection than the entire molecule. When tau (but not MAP2 or MAP1b) is experimentally depleted from neurons, the microtubules in the axon lose their characteristic resistance to katanin. These results, which validate our hypothesis, also suggest a potential explanation for why axonal microtubules deteriorate in neuropathies involving the dissociation of tau from the microtubules.</p>

	]]>
</description>

<author>Liang Qiang et al.</author>


<category>Adenosine Triphosphatases</category>

<category>Animals</category>

<category>Antineoplastic Agents, Phytogenic</category>

<category>Axons</category>

<category>Cell Line</category>

<category>Cell Shape</category>

<category>Cells, Cultured</category>

<category>Down-Regulation</category>

<category>Fibroblasts</category>

<category>Hippocampus</category>

<category>Immunohistochemistry</category>

<category>Microtubule-Associated Proteins</category>

<category>Microtubules</category>

<category>Neuronal Plasticity</category>

<category>Paclitaxel</category>

<category>RNA Interference</category>

<category>Rats</category>

<category>Tauopathies</category>

<category>tau Proteins</category>

</item>






<item>
<title>The alternative splicing of tau exon 10 and its regulatory proteins CLK2 and TRA2-BETA1 changes in sporadic Alzheimer&apos;s disease</title>
<link>http://escholarship.umassmed.edu/andreadis/9</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/9</guid>
<pubDate>Thu, 30 Sep 2010 08:59:24 PDT</pubDate>
<description>
	<![CDATA[
	<p>Pathological inclusions containing fibrillar aggregates of hyperphosphorylated tau protein are a characteristic feature in tauopathies, which include Alzheimer's disease (AD). Tau is a microtubule-associated protein whose transcript undergoes alternative splicing in the brain. Exon 10 encodes one of four microtubule-binding repeats. Exon 10 inclusion gives rise to tau protein isoforms containing four microtubule-binding repeats (4R) whereas exclusion leads to isoforms containing only three repeats (3R). The ratio between 3R and 4R isoforms is tightly controlled via alternative splicing in the human adult nervous system and distortion of this balance results in neurodegeneration. Previous studies showed that several splicing regulators, among them hTRA2-beta1 and CLK2, regulate exon 10 alternative splicing. Like most splicing factors, htra2-beta and clk2 pre-mRNAs are regulated by alternative splicing. Here, we investigated whether human postmortem brain tissue of AD patients reveal differences in alternative splicing patterns of the tau, htra2-beta, presenilin 2 and clk2 genes when compared with age-matched controls. We found that the splicing patterns of all four genes are altered in affected brain areas of sporadic AD patients. In these affected areas, the amount of mRNAs of tau isoforms including exon 10, the htra2-beta1 isoform and an inactive form of clk2 are significantly increased. These findings suggest that a misregulation of alternative splicing seems to contribute to sporadic AD.</p>

	]]>
</description>

<author>Daniela C. Glatz et al.</author>


<category>Aged</category>

<category>Aged, 80 and over</category>

<category> *Alternative Splicing</category>

<category>Alzheimer Disease</category>

<category>Antigens, CD46</category>

<category>Blotting, Northern</category>

<category>Brain</category>

<category>Case-Control Studies</category>

<category>Exons</category>

<category>Female</category>

<category>Gene Expression Regulation</category>

<category>Humans</category>

<category>Male</category>

<category>Middle Aged</category>

<category>Models, Biological</category>

<category>Postmortem Changes</category>

<category>Protein-Serine-Threonine Kinases</category>

<category>Protein-Tyrosine Kinases</category>

<category>RNA, Messenger</category>

<category>Reverse Transcriptase Polymerase Chain Reaction</category>

<category>Transfection</category>

<category>tau Proteins</category>

</item>






<item>
<title>Brain-specific change in alternative splicing of Tau exon 6 in myotonic dystrophy type 1</title>
<link>http://escholarship.umassmed.edu/andreadis/7</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/7</guid>
<pubDate>Thu, 30 Sep 2010 08:59:23 PDT</pubDate>
<description>
	<![CDATA[
	<p>Alternative splicing is altered in myotonic dystrophy of type 1 (DM1), a syndrome caused by an increase of CTG triplet repeats in the 3' untranslated region of the myotonic dystrophy protein kinase gene. Previously, we reported the preferential skipping of Tau exon 2 in DM1 brains. In this study, we analyze the alternative splicing of Tau exon 6 which can be inserted in three different forms (c, p and d) depending on the 3' splice site used. In fact, inclusion of exon 6c decreases in DM1 brains compared to control brains whereas inclusion of 6d increases. Alteration of exon 6 splicing was not observed in DM1 muscle although this exon was inserted in RNAs from normal muscle and DM1 splicing alterations were first described in this organ. In contrast, alteration of exon 2 of Tau mRNA was observed in both muscle and brain. However, co-transfections of a minigene containing exon 6 with CELF or MBNL1 cDNAs, two splicing factor families suspected to be involved in DM1, showed that they influence exon 6 splicing. Altogether, these results show the importance of determining all the exons and organs targeted by mis-splicing to determine the dysregulation mechanisms of mis-splicing in DM1.</p>

	]]>
</description>

<author>Olivier Leroy et al.</author>


<category>*Alternative Splicing</category>

<category>Brain</category>

<category>CCAAT-Enhancer-Binding Protein-delta</category>

<category>Cell Line</category>

<category> *Exons</category>

<category>Humans</category>

<category>Middle Aged</category>

<category>Muscle, Skeletal</category>

<category>Myotonic Dystrophy</category>

<category>Nerve Tissue Proteins</category>

<category>Neuroglia</category>

<category>Neurons</category>

<category>Protein-Serine-Threonine Kinases</category>

<category>RNA-Binding Proteins</category>

<category>tau Proteins</category>

</item>






<item>
<title>SR protein 9G8 modulates splicing of tau exon 10 via its proximal downstream intron, a clustering region for frontotemporal dementia mutations</title>
<link>http://escholarship.umassmed.edu/andreadis/5</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/5</guid>
<pubDate>Thu, 30 Sep 2010 08:59:22 PDT</pubDate>
<description>
	<![CDATA[
	<p>The microtubule-associated protein tau is important to normal neuronal function in the mammalian nervous system. Aggregated tau is the major component of neurofibrillary tangles (NFTs), present in several neurodegenerative diseases, including Alzheimer's and frontotemporal dementia with Parkinsonism (FTDP). Splicing misregulation of adult-specific exon 10 results in expression of abnormal ratios of tau isoforms, leading to FTDP. Positions +3 to +16 of the intron downstream of exon 10 define a clustering region for point mutations that are found in FTDP. The serine/arginine-rich (SR) factor 9G8 strongly inhibits inclusion of tau exon 10. In this study, we established that 9G8 binds directly to this clustering region, requires a wild-type residue at position +14 to inhibit exon inclusion, and RNAi constructs against 9G8 increase exon 10 inclusion. These results indicate that 9G8 plays a key role in regulation of exon 10 splicing and imply a pathogenic role in neurodegenerative diseases.</p>

	]]>
</description>

<author>Lei Gao et al.</author>


<category>Alternative Splicing</category>

<category>Amino Acid Sequence</category>

<category>Animals</category>

<category>Binding Sites</category>

<category>COS Cells</category>

<category>Cercopithecus aethiops</category>

<category>Cerebral Cortex</category>

<category>Dementia</category>

<category>Exons</category>

<category>Gene Silencing</category>

<category>Hela Cells</category>

<category>Humans</category>

<category>Introns</category>

<category>Nucleocytoplasmic Transport Proteins</category>

<category>Point Mutation</category>

<category>RNA Interference</category>

<category>RNA-Binding Proteins</category>

<category>tau Proteins</category>

</item>






<item>
<title>ETR-3 represses Tau exons 2/3 inclusion, a splicing event abnormally enhanced in myotonic dystrophy type I</title>
<link>http://escholarship.umassmed.edu/andreadis/6</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/6</guid>
<pubDate>Thu, 30 Sep 2010 08:59:22 PDT</pubDate>
<description>
	<![CDATA[
	<p>Altered splicing of transcripts, including the insulin receptor (IR) and the cardiac troponin (cTNT), is a key feature of myotonic dystrophy type I (DM1). CELF and MBNL splicing factor members regulate the splicing of those transcripts. We have previously described an alteration of Tau exon 2 splicing in DM1 brain, resulting in the favored exclusion of exon 2. However, the factors required for alternative splicing of Tau exon 2 remain undetermined. Here we report a decreased expression of CELF family member and MBNL transcripts in DM1 brains as assessed by RT-PCR. By using cellular models with a control- or DM1-like splicing pattern of Tau transcripts, we demonstrate that ETR-3 promotes selectively the exclusion of Tau exon 2. These results together with the analysis of Tau exon 6 and IR exon 11 splicing in brain, muscle, and cell models suggest that DM1 splicing alteration of several transcripts involves various factors.</p>

	]]>
</description>

<author>Olivier Leroy et al.</author>


<category>Alternative Splicing</category>

<category>Blotting, Western</category>

<category>Brain</category>

<category>Cell Line, Tumor</category>

<category>Electrophoresis, Polyacrylamide Gel</category>

<category> *Exons</category>

<category>Humans</category>

<category>Middle Aged</category>

<category>Muscle, Skeletal</category>

<category>Myotonic Dystrophy</category>

<category>Nerve Tissue Proteins</category>

<category>Neuroblastoma</category>

<category>Nuclear Proteins</category>

<category>RNA, Messenger</category>

<category>RNA-Binding Proteins</category>

<category>Reverse Transcriptase Polymerase Chain Reaction</category>

<category>Transfection</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau 6D and 6P isoforms inhibit polymerization of full-length tau in vitro</title>
<link>http://escholarship.umassmed.edu/andreadis/3</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/3</guid>
<pubDate>Thu, 30 Sep 2010 08:59:21 PDT</pubDate>
<description>
	<![CDATA[
	<p>Alzheimer's disease and other tauopathies are characterized by the intracellular accumulation of insoluble filaments of the microtubule-associated protein tau. The six canonical tau isoforms in the adult brain consist of an N-terminal "projection" domain followed by a proline-rich region, a microtubule-binding repeat region, and a C-terminal tail. However, alternative splicing in exon 6 produces an additional set of tau isoforms, termed 6D and 6P, which contain only the N-terminus and part of the proline-rich region. We have previously shown that constructs representing N-terminal fragments of tau, which resemble the naturally occurring 6P and 6D isoforms, inhibit polymerization of the full-length protein in an in vitro filament formation assay and traced the inhibitory activity to amino acids 18-42. Here we report that 6P and 6D tau isoforms inhibit polymerization of full-length tau (hTau40) in a similar manner, likely by stabilizing full-length tau in a soluble conformation. The absence of exons 2 and 3 decreased the effectiveness of the 6D isoforms but not the 6P variants or the N-terminal tau fragments from our previous study, indicating that the 18-42 region is not the sole determinant of inhibitory ability. Finally, this paper demonstrates that inhibition is blocked by pseudophosphorylation of tyrosines 18 and 29, providing a potential link between tyrosine phosphorylation and disease progression. Taken together, these results indicate that the 6P/6D isoforms are potential endogenous inhibitors of tau filament formation and suggest a mechanism by which this ability may be disrupted in disease.</p>

	]]>
</description>

<author>Nichole E. Lapointe et al.</author>


<category>Alternative Splicing</category>

<category>Amino Acid Sequence</category>

<category>Humans</category>

<category>Molecular Sequence Data</category>

<category> *Protein Folding</category>

<category>Protein Isoforms</category>

<category>tau Proteins</category>

</item>






<item>
<title>Tau exon 6 is regulated by an intricate interplay of trans factors and cis elements, including multiple branch points</title>
<link>http://escholarship.umassmed.edu/andreadis/4</link>
<guid isPermaLink="true">http://escholarship.umassmed.edu/andreadis/4</guid>
<pubDate>Thu, 30 Sep 2010 08:59:21 PDT</pubDate>
<description>
	<![CDATA[
	<p>Tau is a microtubule-associated protein whose transcript undergoes complex regulated splicing in the mammalian nervous system. Exon 6 of the gene is an alternatively spliced cassette whose expression profile differs from that of the other tau regulated exons, implying the involvement of distinct regulatory factors. Previous work had established the existence and use of two additional 3' splice sites within exon 6 and the influence of splicing factors polypyrimidine binding protein (PTB) and U2AF on its splicing. The present work shows that exon 6 isoforms exist in distinct ratios in different compartments of the nervous system and that splicing of exon 6 is governed by multiple branch points, exonic cis elements and additional trans factors. Recent results show that tau exon 6 is specifically suppressed in the brains of people who suffer from myotonic dystrophy type 1. The understanding of how tau exon 6 splicing is regulated may give us insights into the disease.</p>

	]]>
</description>

<author>Junning Wang et al.</author>


<category>Alternative Splicing</category>

<category>Animals</category>

<category>COS Cells</category>

<category>Cercopithecus aethiops</category>

<category>Exons</category>

<category>Gene Expression</category>

<category>Humans</category>

<category> *Molecular Sequence Data</category>

<category>Mutagenesis</category>

<category>RNA Splice Sites</category>

<category>RNA, Messenger</category>

<category>Reverse Transcriptase Polymerase Chain Reaction</category>

<category>Trans-Activators</category>

<category>tau Proteins</category>

</item>





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